RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 LARGE2Q8N3Y3 721 aa20.16■□□□□ 0.82
SHOX-201ENST00000334060 TTC41PQ6P2S7 1318 aa20.16■□□□□ 0.82
SHOX-201ENST00000334060 SDSP20132 328 aa20.15■□□□□ 0.82
SHOX-201ENST00000334060 SPATA5Q8NB90 893 aa20.15■□□□□ 0.82
SHOX-201ENST00000334060 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
SHOX-201ENST00000334060 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
SHOX-201ENST00000334060 HAUS7Q99871 368 aa20.15■□□□□ 0.82
SHOX-201ENST00000334060 RAD17O75943 681 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 IL1R1P14778 569 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 GTF2IP78347 998 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 ZNF804AQ7Z570 1209 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 IL25Q9H293 177 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 SBF1O95248 1867 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 ZNF384Q8TF68 577 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 EYA3Q99504 573 aa20.14■□□□□ 0.81
SHOX-201ENST00000334060 MYH13Q9UKX3 1938 aa20.13■□□□□ 0.81
SHOX-201ENST00000334060 TRIM6-TRIM34B2RNG4 842 aa20.13■□□□□ 0.81
SHOX-201ENST00000334060 FRAT2O75474 233 aaPredicted RBP20.13■□□□□ 0.81
SHOX-201ENST00000334060 GLRX3O76003 335 aaKnown RBP20.13■□□□□ 0.81
SHOX-201ENST00000334060 PRDX5P30044 214 aa20.13■□□□□ 0.81
SHOX-201ENST00000334060 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
SHOX-201ENST00000334060 COA1Q9GZY4 146 aa20.12■□□□□ 0.81
SHOX-201ENST00000334060 PAG1Q9NWQ8 432 aa20.12■□□□□ 0.81
SHOX-201ENST00000334060 ADAMTSL1Q8N6G6 1762 aa20.12■□□□□ 0.81
SHOX-201ENST00000334060 SHTN1A0MZ66 631 aa20.12■□□□□ 0.81
SHOX-201ENST00000334060 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
SHOX-201ENST00000334060 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
SHOX-201ENST00000334060 GPATCH3Q96I76 525 aa20.11■□□□□ 0.81
SHOX-201ENST00000334060 ZNF512BQ96KM6 892 aaPredicted RBP20.11■□□□□ 0.81
SHOX-201ENST00000334060 ABCF2Q9UG63 623 aa20.11■□□□□ 0.81
SHOX-201ENST00000334060 PCDHAC2Q9Y5I4 1007 aa20.11■□□□□ 0.81
SHOX-201ENST00000334060 LTBP3Q9NS15 1303 aa20.11■□□□□ 0.81
SHOX-201ENST00000334060 SUPT20HQ8NEM7 779 aa20.1■□□□□ 0.81
SHOX-201ENST00000334060 AOX1Q06278 1338 aa20.1■□□□□ 0.81
SHOX-201ENST00000334060 F8W031 263 aaPredicted RBP20.1■□□□□ 0.81
SHOX-201ENST00000334060 ERC2O15083 957 aa20.1■□□□□ 0.81
SHOX-201ENST00000334060 UQCRFS1P1P0C7P4 283 aa20.1■□□□□ 0.81
SHOX-201ENST00000334060 G3V3G9 751 aa20.09■□□□□ 0.81
SHOX-201ENST00000334060 PSMD14O00487 310 aa20.09■□□□□ 0.81
SHOX-201ENST00000334060 CXCL9Q07325 125 aa20.09■□□□□ 0.81
SHOX-201ENST00000334060 DCAF8Q5TAQ9 597 aa20.09■□□□□ 0.81
SHOX-201ENST00000334060 ADGRA1Q86SQ6 560 aa20.09■□□□□ 0.81
SHOX-201ENST00000334060 RNF181Q9P0P0 153 aa20.09■□□□□ 0.81
SHOX-201ENST00000334060 RBM19Q9Y4C8 960 aaKnown RBP20.09■□□□□ 0.81
SHOX-201ENST00000334060 C9orf131Q5VYM1 1079 aa20.08■□□□□ 0.81
SHOX-201ENST00000334060 TTLL5Q6EMB2 1281 aa20.08■□□□□ 0.81
SHOX-201ENST00000334060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.08■□□□□ 0.81
SHOX-201ENST00000334060 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.81
SHOX-201ENST00000334060 IDH1O75874 414 aaKnown RBP20.08■□□□□ 0.8
SHOX-201ENST00000334060 BMP2KLQ5H9B9 411 aa20.08■□□□□ 0.8
SHOX-201ENST00000334060 DACT2Q5SW24 774 aa20.08■□□□□ 0.8
SHOX-201ENST00000334060 NIM1KQ8IY84 436 aa20.08■□□□□ 0.8
SHOX-201ENST00000334060 DIXDC1Q155Q3 683 aa20.07■□□□□ 0.8
SHOX-201ENST00000334060 MFSD14BQ5SR56 506 aa20.07■□□□□ 0.8
SHOX-201ENST00000334060 FAM227BQ96M60 508 aa20.07■□□□□ 0.8
SHOX-201ENST00000334060 GNL3LQ9NVN8 582 aaKnown RBP20.07■□□□□ 0.8
SHOX-201ENST00000334060 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
SHOX-201ENST00000334060 PODNQ7Z5L7 613 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 FSD1Q9BTV5 496 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 DOCK2Q92608 1830 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 LMNB1P20700 586 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 ZNRF3Q9ULT6 936 aa20.06■□□□□ 0.8
SHOX-201ENST00000334060 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
SHOX-201ENST00000334060 SCNN1DP51172 638 aa20.05■□□□□ 0.8
SHOX-201ENST00000334060 KIAA0825Q8IV33 1275 aa20.05■□□□□ 0.8
SHOX-201ENST00000334060 AK9Q5TCS8 1911 aa20.05■□□□□ 0.8
SHOX-201ENST00000334060 A0A0D9SFI3 127 aa20.04■□□□□ 0.8
SHOX-201ENST00000334060 FZD9O00144 591 aa20.04■□□□□ 0.8
SHOX-201ENST00000334060 CCDC129Q6ZRS4 1044 aa20.04■□□□□ 0.8
SHOX-201ENST00000334060 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
SHOX-201ENST00000334060 SEC24BO95487 1268 aa20.04■□□□□ 0.8
SHOX-201ENST00000334060 JDP2Q8WYK2 163 aa20.04■□□□□ 0.8
SHOX-201ENST00000334060 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 MECOMQ03112 1051 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 C8orf34Q49A92 452 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 MAGEB6Q8N7X4 407 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 EVI5LQ96CN4 794 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 LRP2BPQ9P2M1 347 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 PSME4Q14997 1843 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 SEMA3EO15041 775 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 EGFRP00533 1210 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 CNTROBQ8N137 903 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
SHOX-201ENST00000334060 DICER1Q9UPY3 1922 aaKnown RBP20.02■□□□□ 0.8
SHOX-201ENST00000334060 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.8
SHOX-201ENST00000334060 PDE6AP16499 860 aa20.02■□□□□ 0.8
SHOX-201ENST00000334060 NMIQ13287 307 aaPredicted RBP20.02■□□□□ 0.8
SHOX-201ENST00000334060 NSUN4Q96CB9 384 aaKnown RBP20.02■□□□□ 0.8
SHOX-201ENST00000334060 ZNF532Q9HCE3 1301 aa20.02■□□□□ 0.79
SHOX-201ENST00000334060 DDNO94850 711 aaPredicted RBP20.01■□□□□ 0.79
SHOX-201ENST00000334060 CHMLP26374 656 aa20.01■□□□□ 0.79
SHOX-201ENST00000334060 SLC9C2Q5TAH2 1124 aa20.01■□□□□ 0.79
SHOX-201ENST00000334060 STRIP1Q5VSL9 837 aa20.01■□□□□ 0.79
SHOX-201ENST00000334060 CWC27Q6UX04 472 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms