RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 C21orf2O43822 256 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 EIF5BO60841 1220 aaKnown RBP14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 RTFDC1Q9BY42 306 aaPredicted RBP14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 RAD50Q92878 1312 aa14.6□□□□□ -0.07
TRIM49B-201ENST00000332682 REC8O95072 547 aa14.6□□□□□ -0.07
TRIM49B-201ENST00000332682 RUFY2Q8WXA3 655 aa14.6□□□□□ -0.07
TRIM49B-201ENST00000332682 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
TRIM49B-201ENST00000332682 CD209Q9NNX6 404 aa14.6□□□□□ -0.07
TRIM49B-201ENST00000332682 CHD4Q14839 1912 aa14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 IL1R1P14778 569 aa14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 GRIPAP1Q4V328 841 aa14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 EYA3Q99504 573 aa14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
TRIM49B-201ENST00000332682 MAST2Q6P0Q8 1798 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 RIMBP2O15034 1052 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 IDH1O75874 414 aaKnown RBP14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 WASHC4Q2M389 1173 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 LRRFIP1Q32MZ4 808 aaKnown RBP14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 DALRD3Q5D0E6 543 aaKnown RBP14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 ZMYM1Q5SVZ6 1142 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 NLGN2Q8NFZ4 835 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 TBC1D32Q96NH3 1257 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 ZC3H12CQ9C0D7 883 aaKnown RBP14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 COA1Q9GZY4 146 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 WWC3Q9ULE0 1092 aa14.58□□□□□ -0.08
TRIM49B-201ENST00000332682 ARFGEF1Q9Y6D6 1849 aa14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 PDE6AP16499 860 aa14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 ADD2P35612 726 aa14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 CHAF1AQ13111 956 aaPredicted RBP14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 RTKN2Q8IZC4 609 aa14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 ANO2Q9NQ90 1003 aa14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 FER1L6Q2WGJ9 1857 aa14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 GOLGB1Q14789 3259 aaKnown RBP14.57□□□□□ -0.08
TRIM49B-201ENST00000332682 MAP3K12Q12852 859 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 SLC9C2Q5TAH2 1124 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 SOGA3Q5TF21 947 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 ZSCAN25Q6NSZ9 544 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 ZNF589Q86UQ0 364 aaPredicted RBP14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 SUPT20HQ8NEM7 779 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 SEC62Q99442 399 aaKnown RBP14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 PSMD1Q99460 953 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 USP26Q9BXU7 913 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 C22orf23Q9BZE7 217 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 ABCF2Q9UG63 623 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 MAST3O60307 1309 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 SALL1Q9NSC2 1324 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 TCRBV5S4A2TA0A5A2 114 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 UBE3CQ15386 1083 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 WDR66Q8TBY9 1149 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 APPBP2Q92624 585 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 LSG1Q9H089 658 aaKnown RBP14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 LRP2BPQ9P2M1 347 aa14.56□□□□□ -0.08
TRIM49B-201ENST00000332682 CCDC88AQ3V6T2 1871 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 SCN9AQ15858 1988 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 ZNF646O15015 1829 aaPredicted RBP14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 RBM25P49756 843 aaKnown RBP14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 OSBP2Q969R2 916 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 FHDC1Q9C0D6 1143 aaPredicted RBP14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 CCDC171Q6TFL3 1326 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 FAM205AQ6ZU69 1335 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 ZNF532Q9HCE3 1301 aa14.55□□□□□ -0.08
TRIM49B-201ENST00000332682 M0R2C6 588 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 EPB41L2O43491 1005 aaKnown RBP14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 PRDX5P30044 214 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 AOC3Q16853 763 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 DOK7Q18PE1 504 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 CCDC129Q6ZRS4 1044 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 RAI14Q9P0K7 980 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 BCS1LQ9Y276 419 aa14.54□□□□□ -0.08
TRIM49B-201ENST00000332682 PTH1RQ03431 593 aa14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 ZGPATQ8N5A5 531 aaKnown RBP14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 ZNF384Q8TF68 577 aa14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 PUS7LQ9H0K6 701 aaKnown RBP14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 DBNDD1Q9H9R9 158 aa14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 COL4A5P29400 1685 aa14.53□□□□□ -0.08
TRIM49B-201ENST00000332682 PPIP5K2O43314 1243 aa14.52□□□□□ -0.08
TRIM49B-201ENST00000332682 ECE2O60344 883 aa14.52□□□□□ -0.08
TRIM49B-201ENST00000332682 PODNQ7Z5L7 613 aa14.52□□□□□ -0.08
TRIM49B-201ENST00000332682 PSME4Q14997 1843 aa14.52□□□□□ -0.08
TRIM49B-201ENST00000332682 G3V3G9 751 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 IGSF3O75054 1194 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 GTF2IP78347 998 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 MECOMQ03112 1051 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 MFSD14BQ5SR56 506 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
TRIM49B-201ENST00000332682 SPTY2D1Q68D10 685 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms