RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 IDEP14735 1019 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 NDUFA8P51970 172 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 KCNG4Q8TDN1 519 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 CYP7A1P22680 504 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 WTAPQ15007 396 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 CDK5RAP3Q96JB5 506 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 STX8Q9UNK0 236 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 CYP2E1P05181 493 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 JAKMIP3Q5VZ66 844 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 KIAA1524Q8TCG1 905 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 CAPZA3Q96KX2 299 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 PLEKHA4Q9H4M7 779 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
CSGALNACT1-201ENST00000332246 MADDQ8WXG6 1647 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 EYA2O00167 538 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 KIF5CO60282 957 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 MBD4O95243 580 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 FANCCQ00597 558 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 ZNF174Q15697 407 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 DPCR1Q3MIW9 517 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 SYNE4Q8N205 404 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 PTCH1Q13635 1447 aa11.27□□□□□ -0.6
CSGALNACT1-201ENST00000332246 HSPD1P10809 573 aaKnown RBP11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MYOM2P54296 1465 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CLASP1Q7Z460 1538 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCP110O43303 1012 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 EPS15P42566 896 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MTX1Q13505 466 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DNAJC21Q5F1R6 531 aaKnown RBP11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ANO1Q5XXA6 986 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DNAJC10Q8IXB1 793 aa11.27□□□□□ -0.61
CSGALNACT1-201ENST00000332246 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 NECTIN1Q15223 517 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 RTN1Q16799 776 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PGBD1Q96JS3 809 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 VPS16Q9H269 839 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MKNK2Q9HBH9 465 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ZNHIT6Q9NWK9 470 aaKnown RBP11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TET3O43151 1660 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 LRRC7Q96NW7 1537 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 H0YHG0 523 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KRT18P05783 430 aaKnown RBP11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DACH1Q9UI36 760 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TBX22Q9Y458 520 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MAP3K4Q9Y6R4 1608 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 USP27XA6NNY8 438 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 NEMFO60524 1076 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 FGAP02671 866 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 BMS1Q14692 1282 aaKnown RBP11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 E9PCH4 1651 aa11.26□□□□□ -0.61
CSGALNACT1-201ENST00000332246 IRS4O14654 1257 aaPredicted RBP11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DDIT3P35638 169 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 EVCP57679 992 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PIP4K2BP78356 416 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PDLIM2Q96JY6 352 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 EPC1Q9H2F5 836 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 GUCA1BQ9UMX6 200 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KIF1BO60333 1816 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 VWA3AA6NCI4 1184 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 MCM7P33993 719 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ZNF569Q5MCW4 686 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 CCDC181Q5TID7 509 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KRT40Q6A162 431 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 IQCA1Q86XH1 822 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 PSMB7Q99436 277 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TM6SF1Q9BZW5 370 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 TSPYL1Q9H0U9 437 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 AXIN2Q9Y2T1 843 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ITGA6P23229 1130 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 LRRC8AQ8IWT6 810 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 FAM107BQ9H098 131 aa11.25□□□□□ -0.61
CSGALNACT1-201ENST00000332246 IGKV5-2P06315 115 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SLC5A1P13866 664 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ATP5JP18859 108 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ABCA6Q8N139 1617 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 AK7Q96M32 723 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 BTBD18B2RXH4 712 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 DIS3L2Q8IYB7 885 aaKnown RBP11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 FANCLQ9NW38 375 aa11.24□□□□□ -0.61
CSGALNACT1-201ENST00000332246 KCNH3Q9ULD8 1083 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms