RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
DDX41-201ENST00000330503 FOXD4L5Q5VV16 416 aaPredicted RBP20.19■□□□□ 0.82
DDX41-201ENST00000330503 FOXD4L4Q8WXT5 416 aaPredicted RBP20.19■□□□□ 0.82
DDX41-201ENST00000330503 E7EWF7 191 aa20.18■□□□□ 0.82
DDX41-201ENST00000330503 FGAP02671 866 aa20.18■□□□□ 0.82
DDX41-201ENST00000330503 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
DDX41-201ENST00000330503 CARMIL3Q8ND23 1372 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 ZNF804BA4D1E1 1349 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 GYS1P13807 737 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 EXOSC10Q01780 885 aaKnown RBP20.17■□□□□ 0.82
DDX41-201ENST00000330503 CTNNA3Q9UI47 895 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 SMC3Q9UQE7 1217 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 DTNBO60941 627 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 GYG1P46976 350 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 MCTP1Q6DN14 999 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 Q6ZUG5 572 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
DDX41-201ENST00000330503 DOCK2Q92608 1830 aa20.16■□□□□ 0.82
DDX41-201ENST00000330503 ZNF772Q68DY9 489 aaPredicted RBP20.16■□□□□ 0.82
DDX41-201ENST00000330503 DHX32Q7L7V1 743 aaKnown RBP20.16■□□□□ 0.82
DDX41-201ENST00000330503 TNRC6CQ9HCJ0 1690 aaKnown RBP20.16■□□□□ 0.82
DDX41-201ENST00000330503 HMGB1P09429 215 aaKnown RBP20.15■□□□□ 0.82
DDX41-201ENST00000330503 PTMSP20962 102 aa20.15■□□□□ 0.82
DDX41-201ENST00000330503 TXNRD1Q16881 649 aa20.15■□□□□ 0.82
DDX41-201ENST00000330503 FAM84BQ96KN1 310 aaPredicted RBP20.15■□□□□ 0.82
DDX41-201ENST00000330503 MAP3K12Q12852 859 aa20.15■□□□□ 0.82
DDX41-201ENST00000330503 LRRC2Q9BYS8 371 aa20.15■□□□□ 0.82
DDX41-201ENST00000330503 IQSEC3Q9UPP2 1182 aaPredicted RBP20.15■□□□□ 0.82
DDX41-201ENST00000330503 EP400Q96L91 3159 aa20.15■□□□□ 0.82
DDX41-201ENST00000330503 GJB2P29033 226 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
DDX41-201ENST00000330503 GOLGA6L22H0YM25 854 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 SYT1P21579 422 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 HAND2P61296 217 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 PRR5LQ6MZQ0 368 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 LMBRD1Q9NUN5 540 aa20.14■□□□□ 0.81
DDX41-201ENST00000330503 WDR33Q9C0J8 1336 aaKnown RBP20.13■□□□□ 0.81
DDX41-201ENST00000330503 IMMTQ16891 758 aaKnown RBP20.13■□□□□ 0.81
DDX41-201ENST00000330503 FBXO33Q7Z6M2 555 aa20.13■□□□□ 0.81
DDX41-201ENST00000330503 NPHP1O15259 732 aa20.12■□□□□ 0.81
DDX41-201ENST00000330503 KLRK1P26718 216 aa20.12■□□□□ 0.81
DDX41-201ENST00000330503 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
DDX41-201ENST00000330503 AGXT2Q9BYV1 514 aa20.12■□□□□ 0.81
DDX41-201ENST00000330503 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
DDX41-201ENST00000330503 GZF1Q9H116 711 aaPredicted RBP20.12■□□□□ 0.81
DDX41-201ENST00000330503 GNL3LQ9NVN8 582 aaKnown RBP20.12■□□□□ 0.81
DDX41-201ENST00000330503 COL1A1P02452 1464 aaPredicted RBP20.11■□□□□ 0.81
DDX41-201ENST00000330503 STX6O43752 255 aa20.11■□□□□ 0.81
DDX41-201ENST00000330503 STK3Q13188 491 aa20.11■□□□□ 0.81
DDX41-201ENST00000330503 BRF1Q92994 677 aa20.11■□□□□ 0.81
DDX41-201ENST00000330503 CAVIN4Q5BKX8 364 aa20.11■□□□□ 0.81
DDX41-201ENST00000330503 NBPF3Q9H094 633 aa20.11■□□□□ 0.81
DDX41-201ENST00000330503 SERPINB2P05120 415 aa20.1■□□□□ 0.81
DDX41-201ENST00000330503 ZSCAN22P10073 491 aaPredicted RBP20.1■□□□□ 0.81
DDX41-201ENST00000330503 ALX1Q15699 326 aa20.1■□□□□ 0.81
DDX41-201ENST00000330503 SLC51AQ86UW1 340 aa20.1■□□□□ 0.81
DDX41-201ENST00000330503 AIDAQ96BJ3 306 aa20.1■□□□□ 0.81
DDX41-201ENST00000330503 ZNF213O14771 459 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 PLSCR1O15162 318 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 MBD4O95243 580 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 GRAPQ13588 217 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 CHST3Q7LGC8 479 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
DDX41-201ENST00000330503 GTF3C6Q969F1 213 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 LRP2BPQ9P2M1 347 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
DDX41-201ENST00000330503 PRPF40AO75400 957 aaKnown RBP20.09■□□□□ 0.81
DDX41-201ENST00000330503 ARMT1Q9H993 441 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 IRS2Q9Y4H2 1338 aa20.09■□□□□ 0.81
DDX41-201ENST00000330503 DDR1Q08345 913 aa20.08■□□□□ 0.81
DDX41-201ENST00000330503 APOBRQ0VD83 1088 aa20.08■□□□□ 0.81
DDX41-201ENST00000330503 MB21D2Q8IYB1 491 aaPredicted RBP20.08■□□□□ 0.81
DDX41-201ENST00000330503 FBXL16Q8N461 479 aa20.08■□□□□ 0.81
DDX41-201ENST00000330503 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
DDX41-201ENST00000330503 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
DDX41-201ENST00000330503 MTMR6Q9Y217 621 aa20.08■□□□□ 0.81
DDX41-201ENST00000330503 PFKFB2O60825 505 aa20.08■□□□□ 0.8
DDX41-201ENST00000330503 APPP05067 770 aa20.08■□□□□ 0.8
DDX41-201ENST00000330503 VPS37DQ86XT2 251 aa20.08■□□□□ 0.8
DDX41-201ENST00000330503 EPB41L4AQ9HCS5 686 aaPredicted RBP20.08■□□□□ 0.8
DDX41-201ENST00000330503 FGD1P98174 961 aa20.07■□□□□ 0.8
DDX41-201ENST00000330503 ZNF827Q17R98 1081 aa20.07■□□□□ 0.8
DDX41-201ENST00000330503 CRY2Q49AN0 593 aa20.07■□□□□ 0.8
DDX41-201ENST00000330503 TXNRD3Q86VQ6 643 aa20.07■□□□□ 0.8
DDX41-201ENST00000330503 GSG1L2A8MUP6 293 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 APBA3O96018 575 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
DDX41-201ENST00000330503 ADGRA1Q86SQ6 560 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 IFNL3Q8IZI9 196 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 LCORLQ8N3X6 602 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 GPHNQ9NQX3 736 aaPredicted RBP20.06■□□□□ 0.8
DDX41-201ENST00000330503 ABCF2Q9UG63 623 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 POLRMTO00411 1230 aaKnown RBP20.06■□□□□ 0.8
DDX41-201ENST00000330503 PRKAB2O43741 272 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 ANTXR2P58335 489 aa20.06■□□□□ 0.8
DDX41-201ENST00000330503 SCRN1Q12765 414 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms