RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 KCNV1Q6PIU1 500 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 LRRC31Q6UY01 552 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
TRIM49-201ENST00000329758 CCDC150Q8NCX0 1101 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 VEZTQ9HBM0 779 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 TRMT1Q9NXH9 659 aaKnown RBP8.65□□□□□ -1.02
TRIM49-201ENST00000329758 IMPACTQ9P2X3 320 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 MCM8Q9UJA3 840 aa8.65□□□□□ -1.02
TRIM49-201ENST00000329758 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 INHBEP58166 350 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 ICA1Q05084 483 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 CRYMQ14894 314 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 PLEKHO1Q53GL0 409 aaPredicted RBP8.65□□□□□ -1.03
TRIM49-201ENST00000329758 AKAP4Q5JQC9 854 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 OSBPL5Q9H0X9 879 aaPredicted RBP8.65□□□□□ -1.03
TRIM49-201ENST00000329758 ETAA1Q9NY74 926 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 VPS18Q9P253 973 aa8.65□□□□□ -1.03
TRIM49-201ENST00000329758 NCAPD2Q15021 1401 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 TNS3Q68CZ2 1445 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 ATXN2Q99700 1313 aaKnown RBP8.64□□□□□ -1.03
TRIM49-201ENST00000329758 GOLGA6L19H0YKK7 550 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 GPTP24298 496 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 ZNF165P49910 485 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 ETF1P62495 437 aaKnown RBP8.64□□□□□ -1.03
TRIM49-201ENST00000329758 ADCY2Q08462 1091 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 AP1ARQ63HQ0 302 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 CADPS2Q86UW7 1296 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 UNC5CLQ8IV45 518 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 FAM71BQ8TC56 605 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 HNRNPLLQ8WVV9 542 aaKnown RBP8.64□□□□□ -1.03
TRIM49-201ENST00000329758 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 KAT2BQ92831 832 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
TRIM49-201ENST00000329758 SIPA1L3O60292 1781 aaPredicted RBP8.64□□□□□ -1.03
TRIM49-201ENST00000329758 IPO7O95373 1038 aaKnown RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 UBTFL1P0CB47 393 aaPredicted RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 NEFHP12036 1026 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 LONRF2Q1L5Z9 754 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 CWF19L2Q2TBE0 894 aaKnown RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 CLSTN2Q9H4D0 955 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 NEBLO76041 1014 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 MYL6BP14649 208 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 MRPL12P52815 198 aaKnown RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 PDE1AP54750 535 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 ZC3H12AQ5D1E8 599 aaKnown RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 E4F1Q66K89 784 aaPredicted RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 PPP1R42Q7Z4L9 355 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 SH3GL3Q99963 347 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 PAIP2Q9BPZ3 127 aaKnown RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 TRIM6Q9C030 488 aaPredicted RBP8.63□□□□□ -1.03
TRIM49-201ENST00000329758 ACBD3Q9H3P7 528 aa8.63□□□□□ -1.03
TRIM49-201ENST00000329758 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 NF2P35240 595 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 ATP8B2P98198 1209 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 PREPLQ4J6C6 727 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 BRINP3Q76B58 766 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 RSRC2Q7L4I2 434 aaKnown RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 HDXQ7Z353 690 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 PRPF38AQ8NAV1 312 aaKnown RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 TATDN2Q93075 761 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 RILPL2Q969X0 211 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 ADCY9O60503 1353 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 SOS1Q07889 1333 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 NPHP3Q7Z494 1330 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 ANKRD18BA2A2Z9 1011 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 HMMRO75330 724 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 GIGYF1O75420 1035 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 SYT1P21579 422 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 RDXP35241 583 aaKnown RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 SCRN1Q12765 414 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 GRIK3Q13003 919 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 BEND3Q5T5X7 828 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 CPLX2Q6PUV4 134 aaKnown RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 ERCC4Q92889 916 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 BORCS6Q96GS4 357 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 CARD6Q9BX69 1037 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 TEX13AQ9BXU3 409 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 IL25Q9H293 177 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 MAP3K2Q9Y2U5 619 aa8.62□□□□□ -1.03
TRIM49-201ENST00000329758 N4BP2Q86UW6 1770 aaPredicted RBP8.62□□□□□ -1.03
TRIM49-201ENST00000329758 ADAMTS7Q9UKP4 1686 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 CHUKO15111 745 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 SURF6O75683 361 aaKnown RBP8.61□□□□□ -1.03
TRIM49-201ENST00000329758 GNAI3P08754 354 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 ARID5BQ14865 1188 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 IQCB1Q15051 598 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 CNNM3Q8NE01 707 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 N4BP2L2Q92802 583 aaPredicted RBP8.61□□□□□ -1.03
TRIM49-201ENST00000329758 GOLGA1Q92805 767 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms