RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 ZNF772Q68DY9 489 aaPredicted RBP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 DHX32Q7L7V1 743 aaKnown RBP18.85■□□□□ 0.61
PGBD2-201ENST00000329291 CHST3Q7LGC8 479 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 BRF1Q92994 677 aa18.85■□□□□ 0.61
PGBD2-201ENST00000329291 TCRBV5S4A2TA0A5A2 114 aa18.84■□□□□ 0.61
PGBD2-201ENST00000329291 SLC10A5Q5PT55 438 aa18.84■□□□□ 0.61
PGBD2-201ENST00000329291 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
PGBD2-201ENST00000329291 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
PGBD2-201ENST00000329291 PDE6AP16499 860 aa18.83■□□□□ 0.61
PGBD2-201ENST00000329291 TTF1Q15361 905 aaPredicted RBP18.83■□□□□ 0.61
PGBD2-201ENST00000329291 CAVIN1Q6NZI2 390 aaKnown RBP18.83■□□□□ 0.61
PGBD2-201ENST00000329291 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.61
PGBD2-201ENST00000329291 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
PGBD2-201ENST00000329291 RFC4P35249 363 aa18.83■□□□□ 0.6
PGBD2-201ENST00000329291 CDC5LQ99459 802 aaKnown RBP18.83■□□□□ 0.6
PGBD2-201ENST00000329291 F13A1P00488 732 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
PGBD2-201ENST00000329291 CELF1Q92879 486 aaKnown RBP18.82■□□□□ 0.6
PGBD2-201ENST00000329291 LRRC4BQ9NT99 713 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 MYO5AQ9Y4I1 1855 aaKnown RBP18.82■□□□□ 0.6
PGBD2-201ENST00000329291 TAF1P21675 1872 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 JAK2O60674 1132 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 GADD45BO75293 160 aaPredicted RBP18.82■□□□□ 0.6
PGBD2-201ENST00000329291 PHF14O94880 888 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 HMGB1P09429 215 aaKnown RBP18.82■□□□□ 0.6
PGBD2-201ENST00000329291 UBE3CQ15386 1083 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 SLC27A3Q5K4L6 730 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 USP48Q86UV5 1035 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 NBPF5PQ86XG9 351 aaPredicted RBP18.82■□□□□ 0.6
PGBD2-201ENST00000329291 GTF3C6Q969F1 213 aa18.82■□□□□ 0.6
PGBD2-201ENST00000329291 TRIM37O94972 964 aa18.81■□□□□ 0.6
PGBD2-201ENST00000329291 APOBRQ0VD83 1088 aa18.81■□□□□ 0.6
PGBD2-201ENST00000329291 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
PGBD2-201ENST00000329291 ZSCAN25Q6NSZ9 544 aa18.81■□□□□ 0.6
PGBD2-201ENST00000329291 ANKRD18AQ8IVF6 992 aa18.81■□□□□ 0.6
PGBD2-201ENST00000329291 GPHNQ9NQX3 736 aaPredicted RBP18.81■□□□□ 0.6
PGBD2-201ENST00000329291 CNPY2Q9Y2B0 182 aa18.81■□□□□ 0.6
PGBD2-201ENST00000329291 ADRA2BP18089 450 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 LARP1BQ659C4 914 aaKnown RBP18.8■□□□□ 0.6
PGBD2-201ENST00000329291 NKX2-3Q8TAU0 364 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 AGXT2Q9BYV1 514 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 CTNNA3Q9UI47 895 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 IQSEC3Q9UPP2 1182 aaPredicted RBP18.8■□□□□ 0.6
PGBD2-201ENST00000329291 LAMA4Q16363 1823 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 SCRN1Q12765 414 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 TPTE2Q6XPS3 522 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 PANK2Q9BZ23 570 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
PGBD2-201ENST00000329291 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
PGBD2-201ENST00000329291 ARAP2Q8WZ64 1704 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 VPS37CA5D8V6 355 aaPredicted RBP18.79■□□□□ 0.6
PGBD2-201ENST00000329291 FGD1P98174 961 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 IMMTQ16891 758 aaKnown RBP18.79■□□□□ 0.6
PGBD2-201ENST00000329291 ZSCAN23Q3MJ62 389 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 DENND2AQ9ULE3 1009 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 COL24A1Q17RW2 1714 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 HMGB2P26583 209 aaKnown RBP18.79■□□□□ 0.6
PGBD2-201ENST00000329291 GYG1P46976 350 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 MAGEB6Q8N7X4 407 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
PGBD2-201ENST00000329291 TMEM63CQ9P1W3 806 aa18.79■□□□□ 0.6
PGBD2-201ENST00000329291 CDC37L1Q7L3B6 337 aa18.78■□□□□ 0.6
PGBD2-201ENST00000329291 NLRP3Q96P20 1036 aa18.78■□□□□ 0.6
PGBD2-201ENST00000329291 MYH7P12883 1935 aa18.78■□□□□ 0.6
PGBD2-201ENST00000329291 C4AP0C0L4 1744 aa18.78■□□□□ 0.6
PGBD2-201ENST00000329291 PFKFB2O60825 505 aa18.77■□□□□ 0.6
PGBD2-201ENST00000329291 GRPEL1Q9HAV7 217 aa18.77■□□□□ 0.6
PGBD2-201ENST00000329291 NPHP1O15259 732 aa18.77■□□□□ 0.6
PGBD2-201ENST00000329291 CTDNEP1O95476 244 aa18.77■□□□□ 0.6
PGBD2-201ENST00000329291 DNM1Q05193 864 aaKnown RBP18.77■□□□□ 0.6
PGBD2-201ENST00000329291 ZNF213O14771 459 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 TM4SF1P30408 202 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 CCT2P78371 535 aaKnown RBP18.76■□□□□ 0.59
PGBD2-201ENST00000329291 FERMT3Q86UX7 667 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 MB21D2Q8IYB1 491 aaPredicted RBP18.76■□□□□ 0.59
PGBD2-201ENST00000329291 DDX11Q96FC9 970 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 NCOA5Q9HCD5 579 aaKnown RBP18.76■□□□□ 0.59
PGBD2-201ENST00000329291 TCHHQ07283 1943 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.76■□□□□ 0.59
PGBD2-201ENST00000329291 APPP05067 770 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 KLRK1P26718 216 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 PDIA3P30101 505 aaKnown RBP18.76■□□□□ 0.59
PGBD2-201ENST00000329291 MRE11P49959 708 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 ANTXR2P58335 489 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
PGBD2-201ENST00000329291 MAP3K12Q12852 859 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 FAM173BQ6P4H8 233 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 SLC51AQ86UW1 340 aa18.76■□□□□ 0.59
PGBD2-201ENST00000329291 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
PGBD2-201ENST00000329291 TMEM87AQ8NBN3 555 aa18.75■□□□□ 0.59
PGBD2-201ENST00000329291 ARMT1Q9H993 441 aa18.75■□□□□ 0.59
PGBD2-201ENST00000329291 CARMIL3Q8ND23 1372 aa18.75■□□□□ 0.59
PGBD2-201ENST00000329291 ZNF804BA4D1E1 1349 aa18.75■□□□□ 0.59
PGBD2-201ENST00000329291 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
PGBD2-201ENST00000329291 MBD4O95243 580 aa18.74■□□□□ 0.59
PGBD2-201ENST00000329291 ZNF445P59923 1031 aa18.74■□□□□ 0.59
PGBD2-201ENST00000329291 UBE4AQ14139 1066 aa18.74■□□□□ 0.59
PGBD2-201ENST00000329291 AIDAQ96BJ3 306 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms