RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 HMGB1P09429 215 aaKnown RBP17.77■□□□□ 0.44
TPM3-205ENST00000328159 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
TPM3-205ENST00000328159 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.44
TPM3-205ENST00000328159 ZNF532Q9HCE3 1301 aa17.77■□□□□ 0.44
TPM3-205ENST00000328159 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 TCRBV5S4A2TA0A5A2 114 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 TTLL5Q6EMB2 1281 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 E7EWF7 191 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 TM4SF1P30408 202 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 MAP3K12Q12852 859 aa17.76■□□□□ 0.43
TPM3-205ENST00000328159 GYS1P13807 737 aa17.75■□□□□ 0.43
TPM3-205ENST00000328159 TXNRD1Q16881 649 aa17.75■□□□□ 0.43
TPM3-205ENST00000328159 CNBD1Q8NA66 436 aa17.75■□□□□ 0.43
TPM3-205ENST00000328159 GNL3LQ9NVN8 582 aaKnown RBP17.75■□□□□ 0.43
TPM3-205ENST00000328159 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 FGAP02671 866 aa17.74■□□□□ 0.43
TPM3-205ENST00000328159 HMGB2P26583 209 aaKnown RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 GYG1P46976 350 aa17.74■□□□□ 0.43
TPM3-205ENST00000328159 FOXD4L5Q5VV16 416 aaPredicted RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 Q6ZUG5 572 aa17.74■□□□□ 0.43
TPM3-205ENST00000328159 DHX32Q7L7V1 743 aaKnown RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 NECAB1Q8N987 351 aa17.74■□□□□ 0.43
TPM3-205ENST00000328159 FOXD4L4Q8WXT5 416 aaPredicted RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
TPM3-205ENST00000328159 WTIPA6NIX2 430 aaPredicted RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 IMMTQ16891 758 aaKnown RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 SKOR2Q2VWA4 1001 aaPredicted RBP17.74■□□□□ 0.43
TPM3-205ENST00000328159 MCTP1Q6DN14 999 aa17.74■□□□□ 0.43
TPM3-205ENST00000328159 CAVIN4Q5BKX8 364 aa17.73■□□□□ 0.43
TPM3-205ENST00000328159 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
TPM3-205ENST00000328159 PROM2Q8N271 834 aa17.73■□□□□ 0.43
TPM3-205ENST00000328159 MAGEB6Q8N7X4 407 aa17.73■□□□□ 0.43
TPM3-205ENST00000328159 GJB2P29033 226 aa17.72■□□□□ 0.43
TPM3-205ENST00000328159 EXOSC10Q01780 885 aaKnown RBP17.72■□□□□ 0.43
TPM3-205ENST00000328159 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
TPM3-205ENST00000328159 FAM84BQ96KN1 310 aaPredicted RBP17.71■□□□□ 0.43
TPM3-205ENST00000328159 IQSEC3Q9UPP2 1182 aaPredicted RBP17.71■□□□□ 0.43
TPM3-205ENST00000328159 SYT1P21579 422 aa17.71■□□□□ 0.43
TPM3-205ENST00000328159 HAND2P61296 217 aa17.71■□□□□ 0.43
TPM3-205ENST00000328159 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
TPM3-205ENST00000328159 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
TPM3-205ENST00000328159 COL1A1P02452 1464 aaPredicted RBP17.7■□□□□ 0.42
TPM3-205ENST00000328159 STX6O43752 255 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 SERPINB2P05120 415 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 FGD1P98174 961 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 GRAPQ13588 217 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 FBXO33Q7Z6M2 555 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
TPM3-205ENST00000328159 BRF1Q92994 677 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 LRP2BPQ9P2M1 347 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 MYH13Q9UKX3 1938 aa17.7■□□□□ 0.42
TPM3-205ENST00000328159 ZNF213O14771 459 aa17.69■□□□□ 0.42
TPM3-205ENST00000328159 MBD4O95243 580 aa17.69■□□□□ 0.42
TPM3-205ENST00000328159 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
TPM3-205ENST00000328159 ST5P78524 1137 aa17.69■□□□□ 0.42
TPM3-205ENST00000328159 STK3Q13188 491 aa17.69■□□□□ 0.42
TPM3-205ENST00000328159 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
TPM3-205ENST00000328159 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
TPM3-205ENST00000328159 SEMA3EO15041 775 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 PLSCR1O15162 318 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 APPP05067 770 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 ALX1Q15699 326 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 GTF3C6Q969F1 213 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
TPM3-205ENST00000328159 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 KLRK1P26718 216 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 CHAMP1Q96JM3 812 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 ARMT1Q9H993 441 aa17.68■□□□□ 0.42
TPM3-205ENST00000328159 ZMYM6O95789 1325 aa17.67■□□□□ 0.42
TPM3-205ENST00000328159 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
TPM3-205ENST00000328159 DTNBO60941 627 aa17.67■□□□□ 0.42
TPM3-205ENST00000328159 APBA3O96018 575 aa17.67■□□□□ 0.42
TPM3-205ENST00000328159 RXRBP28702 533 aa17.67■□□□□ 0.42
TPM3-205ENST00000328159 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
TPM3-205ENST00000328159 ABCF2Q9UG63 623 aa17.67■□□□□ 0.42
TPM3-205ENST00000328159 PFKFB2O60825 505 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 CYP7A1P22680 504 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 HIBADHP31937 336 aaKnown RBP17.66■□□□□ 0.42
TPM3-205ENST00000328159 DDR1Q08345 913 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 APOBRQ0VD83 1088 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 NCOA7Q8NI08 942 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
TPM3-205ENST00000328159 NBPF3Q9H094 633 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 TFCP2L1Q9NZI6 479 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
TPM3-205ENST00000328159 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 CACNA1SQ13698 1873 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
TPM3-205ENST00000328159 GNAT2P19087 354 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 MCM5P33992 734 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 CHST3Q7LGC8 479 aa17.66■□□□□ 0.42
TPM3-205ENST00000328159 RALYLQ86SE5 291 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms