RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 RHOXF2BP0C7M4 288 aa11.06□□□□□ -0.64
DDX53-201ENST00000327968 RESTQ13127 1097 aa11.06□□□□□ -0.64
DDX53-201ENST00000327968 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
DDX53-201ENST00000327968 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
DDX53-201ENST00000327968 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 DPF2Q92785 391 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 MRFAP1L1Q96HT8 127 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 PCDHA7Q9UN72 937 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 CLIC4Q9Y696 253 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 GOLIM4O00461 696 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 NEMFO60524 1076 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 TOP1P11387 765 aaKnown RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 COBLO75128 1261 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 FAM160A1Q05DH4 1040 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 KLHL10Q6JEL2 608 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 MRPS27Q92552 414 aaKnown RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 LRRC59Q96AG4 307 aaKnown RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 FEZ2Q9UHY8 353 aaPredicted RBP11.05□□□□□ -0.64
DDX53-201ENST00000327968 ROBO1Q9Y6N7 1651 aa11.05□□□□□ -0.64
DDX53-201ENST00000327968 CASQ1P31415 396 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 CYP2C19P33261 490 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 FANCCQ00597 558 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 SLC39A6Q13433 755 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 LONRF3Q496Y0 759 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 ARHGEF25Q86VW2 580 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 ZNF396Q96N95 335 aaPredicted RBP11.04□□□□□ -0.64
DDX53-201ENST00000327968 SUGCTQ9HAC7 445 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
DDX53-201ENST00000327968 SASH1O94885 1247 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 CYP21A2P08686 494 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 GSDMDP57764 484 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 ZNF827Q17R98 1081 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 FKBP15Q5T1M5 1219 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 BEND3Q5T5X7 828 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 BRINP3Q76B58 766 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 TRMT44Q8IYL2 757 aaKnown RBP11.04□□□□□ -0.64
DDX53-201ENST00000327968 PES1O00541 588 aaKnown RBP11.04□□□□□ -0.64
DDX53-201ENST00000327968 ETF1P62495 437 aaKnown RBP11.04□□□□□ -0.64
DDX53-201ENST00000327968 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
DDX53-201ENST00000327968 ELP1O95163 1332 aa11.04□□□□□ -0.64
DDX53-201ENST00000327968 FKBP4Q02790 459 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDX53-201ENST00000327968 MTX1Q13505 466 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 RASSF4Q9H2L5 321 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 ARFGAP3Q9NP61 516 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.03□□□□□ -0.64
DDX53-201ENST00000327968 ORC3Q9UBD5 711 aaPredicted RBP11.03□□□□□ -0.64
DDX53-201ENST00000327968 RGPD5Q99666 1765 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 SASH3O75995 380 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 SYCP1Q15431 976 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 TM6SF1Q9BZW5 370 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 PNOCQ13519 176 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 POLA2Q14181 598 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 DRC1Q96MC2 740 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 WDR24Q96S15 920 aa11.03□□□□□ -0.64
DDX53-201ENST00000327968 CRB1P82279 1406 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 ERBB3P21860 1342 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 TTC41PQ6P2S7 1318 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 LEKR1Q6ZMV7 388 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 ERC1Q8IUD2 1116 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 C8orf76Q96K31 380 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 AIFM3Q96NN9 605 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 MYD88Q99836 296 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 PLCH1Q4KWH8 1693 aa11.02□□□□□ -0.64
DDX53-201ENST00000327968 TAF5LO75529 589 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.65
DDX53-201ENST00000327968 TFCP2Q12800 502 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 CLIC6Q96NY7 704 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 PDE11AQ9HCR9 933 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 SLAIN2Q9P270 581 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 MYO1CO00159 1063 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 TIMM10P62072 90 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 PPP2R3AQ06190 1150 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 E2F4Q16254 413 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 AK7Q96M32 723 aa11.02□□□□□ -0.65
DDX53-201ENST00000327968 ZSCAN16Q9H4T2 348 aaPredicted RBP11.02□□□□□ -0.65
DDX53-201ENST00000327968 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
DDX53-201ENST00000327968 COL14A1Q05707 1796 aaKnown RBP11.01□□□□□ -0.65
DDX53-201ENST00000327968 CTAGE5O15320 804 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 ZNF202O95125 648 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 GCP02774 474 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 APPP05067 770 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 STX17P56962 302 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 GPIHBP1Q8IV16 184 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 KIAA1468Q9P260 1216 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 AOX1Q06278 1338 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 KIF2AO00139 706 aaPredicted RBP11.01□□□□□ -0.65
DDX53-201ENST00000327968 N4BP1O75113 896 aaKnown RBP11.01□□□□□ -0.65
DDX53-201ENST00000327968 UBE3BQ7Z3V4 1068 aa11.01□□□□□ -0.65
DDX53-201ENST00000327968 PARD6BQ9BYG5 372 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms