RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 SASH3O75995 380 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 TOP1P11387 765 aaKnown RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 ADKP55263 362 aaKnown RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 RAD51AP2Q09MP3 1159 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 AKAP4Q5JQC9 854 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 RICTORQ6R327 1708 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 IMPACTQ9P2X3 320 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 LMAN1P49257 510 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 PDE4CQ08493 712 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 CLIC6Q96NY7 704 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 WDR24Q96S15 920 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 A0A087WZG4 1122 aa16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 ALDH8A1Q9H2A2 487 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-201ENST00000326828 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 KIF28PB7ZC32 967 aa16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 HOXB7P09629 217 aa16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 LLPHQ9BRT6 129 aaKnown RBP16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 FANCLQ9NW38 375 aa16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 FAM53CQ9NYF3 392 aa16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 ADGRL3Q9HAR2 1447 aa16.52■□□□□ 0.24
CHRNA3-201ENST00000326828 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.23
CHRNA3-201ENST00000326828 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.23
CHRNA3-201ENST00000326828 MCM6Q14566 821 aa16.52■□□□□ 0.23
CHRNA3-201ENST00000326828 LMBR1LQ6UX01 489 aa16.52■□□□□ 0.23
CHRNA3-201ENST00000326828 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 NLRP12P59046 1061 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 NCAPHQ15003 741 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 CPLX3Q8WVH0 158 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 TNRQ92752 1358 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 SYKP43405 635 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 PSME1Q06323 249 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 SMC1AQ14683 1233 aaKnown RBP16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 PAG1Q9NWQ8 432 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 PUF60Q9UHX1 559 aaKnown RBP16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 TSPOAP1O95153 1857 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 TRIM66O15016 1216 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 WDHD1O75717 1129 aaPredicted RBP16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 CASQ1P31415 396 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 RTEL1Q9NZ71 1219 aa16.51■□□□□ 0.23
CHRNA3-201ENST00000326828 TRIM65Q6PJ69 517 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 KBTBD3Q8NAB2 608 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 IP6K1Q92551 441 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 TECPR2O15040 1411 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 MROH7-TTC4A0A0A0MT08 1334 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 TADA3O75528 432 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 HMGB1P09429 215 aaKnown RBP16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 KCNA6P17658 529 aa16.5■□□□□ 0.23
CHRNA3-201ENST00000326828 FOXN1O15353 648 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 KCNG4Q8TDN1 519 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 PARP3Q9Y6F1 533 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 PHACTR2O75167 634 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 HAUS7Q99871 368 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 PPP2R2CQ9Y2T4 447 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 ANO1Q5XXA6 986 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 WWC2Q6AWC2 1192 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
CHRNA3-201ENST00000326828 ZRANB2O95218 330 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 LRRFIP1Q32MZ4 808 aaKnown RBP16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 CCDC12Q8WUD4 166 aaPredicted RBP16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 PHKBQ93100 1093 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 LCMT1Q9UIC8 334 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 ANKRD65E5RJM6 399 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 TBC1D8O95759 1140 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 PDIA6Q15084 440 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 PARD6BQ9BYG5 372 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
CHRNA3-201ENST00000326828 M0R2C6 588 aa16.47■□□□□ 0.23
CHRNA3-201ENST00000326828 PRC1O43663 620 aa16.47■□□□□ 0.23
CHRNA3-201ENST00000326828 IFIT1P09914 478 aaKnown RBP16.47■□□□□ 0.23
CHRNA3-201ENST00000326828 MTF1Q14872 753 aa16.47■□□□□ 0.23
CHRNA3-201ENST00000326828 ZSCAN26Q16670 478 aa16.47■□□□□ 0.23
CHRNA3-201ENST00000326828 REXO1L1PQ8IX06 675 aa16.47■□□□□ 0.23
CHRNA3-201ENST00000326828 UBE2Q2LH0YL09 131 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms