RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 BEGAINQ9BUH8 593 aa10.29□□□□□ -0.76
CCNC-201ENST00000326298 USP44Q9H0E7 712 aa10.29□□□□□ -0.76
CCNC-201ENST00000326298 UTYO14607 1347 aa10.29□□□□□ -0.76
CCNC-201ENST00000326298 IL1R1P14778 569 aa10.29□□□□□ -0.76
CCNC-201ENST00000326298 C15orf52Q6ZUT6 534 aaKnown RBP10.29□□□□□ -0.76
CCNC-201ENST00000326298 CNNM1Q9NRU3 951 aa10.29□□□□□ -0.76
CCNC-201ENST00000326298 IQSEC3Q9UPP2 1182 aaPredicted RBP10.29□□□□□ -0.76
CCNC-201ENST00000326298 RIPOR2Q9Y4F9 1068 aa10.29□□□□□ -0.76
CCNC-201ENST00000326298 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
CCNC-201ENST00000326298 TRPA1O75762 1119 aa10.28□□□□□ -0.76
CCNC-201ENST00000326298 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
CCNC-201ENST00000326298 CDAN1Q8IWY9 1227 aa10.28□□□□□ -0.76
CCNC-201ENST00000326298 TRMT2AQ8IZ69 625 aaKnown RBP10.28□□□□□ -0.76
CCNC-201ENST00000326298 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
CCNC-201ENST00000326298 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
CCNC-201ENST00000326298 PRMT6Q96LA8 375 aaPredicted RBP10.28□□□□□ -0.76
CCNC-201ENST00000326298 RNF186Q9NXI6 227 aa10.28□□□□□ -0.76
CCNC-201ENST00000326298 SSC5DA1L4H1 1573 aa10.28□□□□□ -0.76
CCNC-201ENST00000326298 CLRN2A0PK11 232 aa10.27□□□□□ -0.76
CCNC-201ENST00000326298 RABL6Q3YEC7 729 aaPredicted RBP10.27□□□□□ -0.76
CCNC-201ENST00000326298 E9PSI1 815 aa10.27□□□□□ -0.77
CCNC-201ENST00000326298 TAF7LQ5H9L4 462 aa10.27□□□□□ -0.77
CCNC-201ENST00000326298 MYO3BQ8WXR4 1341 aa10.27□□□□□ -0.77
CCNC-201ENST00000326298 PTPN12Q05209 780 aaKnown RBP10.26□□□□□ -0.77
CCNC-201ENST00000326298 VGLL2Q8N8G2 317 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 MCOLN1Q9GZU1 580 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
CCNC-201ENST00000326298 PAPPA2Q9BXP8 1791 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 CFAP100Q494V2 611 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
CCNC-201ENST00000326298 CCDC102AQ96A19 550 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 R3HDMLQ9H3Y0 253 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
CCNC-201ENST00000326298 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
CCNC-201ENST00000326298 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
CCNC-201ENST00000326298 RFX5P48382 616 aaPredicted RBP10.25□□□□□ -0.77
CCNC-201ENST00000326298 ZNF804AQ7Z570 1209 aa10.25□□□□□ -0.77
CCNC-201ENST00000326298 CLMNQ96JQ2 1002 aa10.25□□□□□ -0.77
CCNC-201ENST00000326298 DEFB129Q9H1M3 183 aa10.25□□□□□ -0.77
CCNC-201ENST00000326298 TTLL12Q14166 644 aaPredicted RBP10.25□□□□□ -0.77
CCNC-201ENST00000326298 DLGAP5Q15398 846 aa10.25□□□□□ -0.77
CCNC-201ENST00000326298 CCDC85CA6NKD9 419 aa10.24□□□□□ -0.77
CCNC-201ENST00000326298 BCAMP50895 628 aa10.24□□□□□ -0.77
CCNC-201ENST00000326298 MFSD14BQ5SR56 506 aa10.24□□□□□ -0.77
CCNC-201ENST00000326298 NBPF12Q5TAG4 269 aaPredicted RBP10.24□□□□□ -0.77
CCNC-201ENST00000326298 SMC4Q9NTJ3 1288 aa10.24□□□□□ -0.77
CCNC-201ENST00000326298 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
CCNC-201ENST00000326298 PTPRCP08575 1304 aa10.24□□□□□ -0.77
CCNC-201ENST00000326298 CA12O43570 354 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 TBC1D8O95759 1140 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
CCNC-201ENST00000326298 FKBP1BP68106 108 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 DGKZQ13574 1117 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 UBE4AQ14139 1066 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 FBXO33Q7Z6M2 555 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 ANGEL1Q9UNK9 670 aaKnown RBP10.23□□□□□ -0.77
CCNC-201ENST00000326298 FAM205AQ6ZU69 1335 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 CACNB3P54284 484 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 LDLRAD1Q5T700 205 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 ATG9AQ7Z3C6 839 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 TDRD3Q9H7E2 651 aaKnown RBP10.23□□□□□ -0.77
CCNC-201ENST00000326298 VEZTQ9HBM0 779 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 HDAC9Q9UKV0 1011 aa10.23□□□□□ -0.77
CCNC-201ENST00000326298 PDE8BO95263 885 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 RBM5P52756 815 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCNC-201ENST00000326298 CHAF1AQ13111 956 aaPredicted RBP10.22□□□□□ -0.77
CCNC-201ENST00000326298 METTL24Q5JXM2 366 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
CCNC-201ENST00000326298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.22□□□□□ -0.77
CCNC-201ENST00000326298 AKAP11Q9UKA4 1901 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 COL1A1P02452 1464 aaPredicted RBP10.22□□□□□ -0.77
CCNC-201ENST00000326298 FGFR2P21802 821 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 GJA5P36382 358 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 RASA3Q14644 834 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 APOBEC3FQ8IUX4 373 aaKnown RBP10.22□□□□□ -0.77
CCNC-201ENST00000326298 SIL1Q9H173 461 aa10.22□□□□□ -0.77
CCNC-201ENST00000326298 PA2G4Q9UQ80 394 aaKnown RBP10.22□□□□□ -0.77
CCNC-201ENST00000326298 MROH5Q6ZUA9 1318 aa10.21□□□□□ -0.77
CCNC-201ENST00000326298 FKBP1AP62942 108 aaKnown RBP10.21□□□□□ -0.77
CCNC-201ENST00000326298 ALDH1L2Q3SY69 923 aa10.21□□□□□ -0.77
CCNC-201ENST00000326298 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.77
CCNC-201ENST00000326298 TEPSINQ96N21 525 aa10.21□□□□□ -0.77
CCNC-201ENST00000326298 MEIS3Q99687 375 aa10.21□□□□□ -0.77
CCNC-201ENST00000326298 SAGE1Q9NXZ1 904 aa10.21□□□□□ -0.77
CCNC-201ENST00000326298 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.77
CCNC-201ENST00000326298 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
CCNC-201ENST00000326298 USP2O75604 605 aaPredicted RBP10.21□□□□□ -0.78
CCNC-201ENST00000326298 RARSP54136 660 aaKnown RBP10.21□□□□□ -0.78
CCNC-201ENST00000326298 SPRYD7Q5W111 196 aa10.21□□□□□ -0.78
CCNC-201ENST00000326298 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.78
CCNC-201ENST00000326298 TMEM39BQ9GZU3 492 aa10.21□□□□□ -0.78
CCNC-201ENST00000326298 TCP10L2B9ZVM9 353 aa10.2□□□□□ -0.78
CCNC-201ENST00000326298 CRKP46108 304 aa10.2□□□□□ -0.78
CCNC-201ENST00000326298 TM4SF4P48230 202 aa10.2□□□□□ -0.78
CCNC-201ENST00000326298 CAP1Q01518 475 aa10.2□□□□□ -0.78
CCNC-201ENST00000326298 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
CCNC-201ENST00000326298 ZNF296Q8WUU4 475 aaPredicted RBP10.2□□□□□ -0.78
CCNC-201ENST00000326298 LRRFIP2Q9Y608 721 aaKnown RBP10.2□□□□□ -0.78
CCNC-201ENST00000326298 EYA2O00167 538 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms