RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 TMX3Q96JJ7 454 aa20.24■□□□□ 0.83
PXN-203ENST00000323871 CCDC113Q9H0I3 377 aa20.24■□□□□ 0.83
PXN-203ENST00000323871 MIGA1Q8NAN2 632 aa20.24■□□□□ 0.83
PXN-203ENST00000323871 SMC1AQ14683 1233 aaKnown RBP20.24■□□□□ 0.83
PXN-203ENST00000323871 HELBQ8NG08 1087 aaPredicted RBP20.24■□□□□ 0.83
PXN-203ENST00000323871 WDR66Q8TBY9 1149 aa20.24■□□□□ 0.83
PXN-203ENST00000323871 COL17A1Q9UMD9 1497 aaPredicted RBP20.23■□□□□ 0.83
PXN-203ENST00000323871 VAMP4O75379 141 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 TNNT1P13805 278 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 LMAN1P49257 510 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 CFAP74Q9C0B2 1584 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 BICC1Q9H694 974 aaKnown RBP20.23■□□□□ 0.83
PXN-203ENST00000323871 BICDL2A1A5D9 508 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 EYA2O00167 538 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 HOMER2Q9NSB8 354 aa20.23■□□□□ 0.83
PXN-203ENST00000323871 NEO1Q92859 1461 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 CEP85Q6P2H3 762 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 MMRN2Q9H8L6 949 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 ITGA6P23229 1130 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 ALDH1B1P30837 517 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 CYLC1P35663 651 aaPredicted RBP20.22■□□□□ 0.83
PXN-203ENST00000323871 ZNF165P49910 485 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 DPP8Q6V1X1 898 aaPredicted RBP20.22■□□□□ 0.83
PXN-203ENST00000323871 SLC52A2Q9HAB3 445 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 BIN2Q9UBW5 565 aaPredicted RBP20.22■□□□□ 0.83
PXN-203ENST00000323871 HS2ST1Q7LGA3 356 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 STK24Q9Y6E0 443 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 IGHDP01880 384 aa20.22■□□□□ 0.83
PXN-203ENST00000323871 AKR1B10O60218 316 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 FMNL3Q8IVF7 1028 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 TBC1D32Q96NH3 1257 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 DCTPP1Q9H773 170 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 PTPRKQ15262 1439 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 ZFYVE16Q7Z3T8 1539 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 AFMP43652 599 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
PXN-203ENST00000323871 NECAB1Q8N987 351 aa20.21■□□□□ 0.83
PXN-203ENST00000323871 SHTN1A0MZ66 631 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 DNA2P51530 1060 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 FAM98CQ17RN3 349 aaKnown RBP20.2■□□□□ 0.82
PXN-203ENST00000323871 LARGE2Q8N3Y3 721 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 INCENPQ9NQS7 918 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 DKC1O60832 514 aaKnown RBP eCLIP20.2■□□□□ 0.823e-6■■■■■ 27.9
PXN-203ENST00000323871 BRAPQ7Z569 592 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 LRRC2Q9BYS8 371 aa20.2■□□□□ 0.82
PXN-203ENST00000323871 DHX32Q7L7V1 743 aaKnown RBP20.2■□□□□ 0.82
PXN-203ENST00000323871 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
PXN-203ENST00000323871 BACH1O14867 736 aa20.19■□□□□ 0.82
PXN-203ENST00000323871 MBD4O95243 580 aa20.19■□□□□ 0.82
PXN-203ENST00000323871 KIAA0753Q2KHM9 967 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 LMBR1Q8WVP7 490 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 SREK1Q8WXA9 508 aaKnown RBP20.18■□□□□ 0.82
PXN-203ENST00000323871 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 CALCOCO1Q9P1Z2 691 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 MRVI1Q9Y6F6 885 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 NIM1KQ8IY84 436 aa20.18■□□□□ 0.82
PXN-203ENST00000323871 HLTFQ14527 1009 aaKnown RBP eCLIP20.17■□□□□ 0.82
PXN-203ENST00000323871 IKBKGQ9Y6K9 419 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 IVNS1ABPQ9Y6Y0 642 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 ERVV-2B6SEH9 535 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 APBA3O96018 575 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 PPP1R2P41236 205 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 CREB3L3Q68CJ9 461 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 MROH5Q6ZUA9 1318 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 CKAP4Q07065 602 aaKnown RBP20.17■□□□□ 0.82
PXN-203ENST00000323871 DTHD1Q6ZMT9 781 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 TBC1D22AQ8WUA7 517 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 RAB3GAP1Q15042 981 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 ZNF354CQ86Y25 554 aa20.17■□□□□ 0.82
PXN-203ENST00000323871 TAF12Q16514 161 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 LRSAM1Q6UWE0 723 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 CEP83Q9Y592 693 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 SPTLC2O15270 562 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 TMEM87BQ96K49 555 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 FAM89AQ96GI7 184 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 SELENOOQ9BVL4 669 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 USP25Q9UHP3 1055 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 FERP16591 822 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
PXN-203ENST00000323871 DNMT1P26358 1616 aaKnown RBP20.15■□□□□ 0.82
PXN-203ENST00000323871 RPL13P26373 211 aaKnown RBP20.15■□□□□ 0.82
PXN-203ENST00000323871 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
PXN-203ENST00000323871 UBASH3AP57075 661 aa20.15■□□□□ 0.82
PXN-203ENST00000323871 GDPD2Q9HCC8 539 aa20.15■□□□□ 0.82
PXN-203ENST00000323871 RASAL2Q9UJF2 1139 aa20.15■□□□□ 0.82
PXN-203ENST00000323871 SBNO2Q9Y2G9 1366 aa20.15■□□□□ 0.82
PXN-203ENST00000323871 ATL3Q6DD88 541 aa20.15■□□□□ 0.82
PXN-203ENST00000323871 CCDC117Q8IWD4 279 aaPredicted RBP20.15■□□□□ 0.82
PXN-203ENST00000323871 TRERF1Q96PN7 1200 aa20.15■□□□□ 0.82
PXN-203ENST00000323871 A0A1B0GUL7 405 aa20.14■□□□□ 0.82
PXN-203ENST00000323871 TCIRG1Q13488 830 aa20.14■□□□□ 0.82
PXN-203ENST00000323871 ZBED4O75132 1171 aa20.14■□□□□ 0.81
PXN-203ENST00000323871 PPFIA3O75145 1194 aa20.14■□□□□ 0.81
PXN-203ENST00000323871 F13A1P00488 732 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms