RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 PHEXP78562 749 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 RBBP5Q15291 538 aaKnown RBP9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 CCDC77Q9BR77 488 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 FNDC3AQ9Y2H6 1198 aaKnown RBP9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 GOLGA6BA6NDN3 693 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 IGHDP01880 384 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 PPP1R7Q15435 360 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 GPR162Q16538 588 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 SELENOOQ9BVL4 669 aa9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.81
SH3TC2-201ENST00000323829 CCDC196A0A1B0GTZ2 297 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 TLDC2A0PJX2 215 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 ATP11AP98196 1134 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 TTF1Q15361 905 aaPredicted RBP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 CCDC83Q8IWF9 413 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 CABP5Q9NP86 173 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 AKAP2Q9Y2D5 859 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 TNRQ92752 1358 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 RARSP54136 660 aaKnown RBP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 IFIT5Q13325 482 aaKnown RBP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 RMDN2Q96LZ7 410 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 SCHIP1Q9P0W5 487 aaPredicted RBP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 EHBP1L1Q8N3D4 1523 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 ITIH3Q06033 890 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 IFI16Q16666 785 aaKnown RBP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 IMPG2Q9BZV3 1241 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 ZNF408Q9H9D4 720 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 SPC25Q9HBM1 224 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 GIMAP4Q9NUV9 329 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 NPHP3Q7Z494 1330 aa9.96□□□□□ -0.82
SH3TC2-201ENST00000323829 TBCCQ15814 346 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 INTS8Q75QN2 995 aaKnown RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 TBCAO75347 108 aaKnown RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 CCDC122Q5T0U0 273 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 TEX13AQ9BXU3 409 aaPredicted RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 LUC7L2Q9Y383 392 aaKnown RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 CCT6AP40227 531 aaKnown RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 NUCB1Q02818 461 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 UVSSAQ2YD98 709 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 RSRC1Q96IZ7 334 aaKnown RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 EXOC1Q9NV70 894 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 IVLP07476 585 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 MCM6Q14566 821 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 CPLX4Q7Z7G2 160 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 PTGS1P23219 599 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 ZSCAN23Q3MJ62 389 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 H0YC42 278 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 ABL1P00519 1130 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 MIS18AQ9NYP9 233 aa9.95□□□□□ -0.82
SH3TC2-201ENST00000323829 BIN1O00499 593 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 CCDC183Q5T5S1 534 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 RINLQ6ZS11 566 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 RAB11FIP4Q86YS3 637 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 GJA3Q9Y6H8 435 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 SYNDIG1LA6NDD5 238 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 SNX21Q969T3 373 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 CCDC194A0A1B0GVG4 234 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 AFAP1L2Q8N4X5 818 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 LRRC59Q96AG4 307 aaKnown RBP9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 SPDL1Q96EA4 605 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 C16orf45Q96MC5 204 aaPredicted RBP9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 USP25Q9UHP3 1055 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 RPRD2Q5VT52 1461 aaKnown RBP9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 CACNA2D3Q8IZS8 1091 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 TTC14Q96N46 770 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 ABCF3Q9NUQ8 709 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 MKL2Q9ULH7 1088 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 RPS6KA2Q15349 733 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 TMC6Q7Z403 805 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 POMGNT1Q8WZA1 660 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 GOLGA6CA6NDK9 693 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 GOLGA6DP0CG33 693 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 IRX3P78415 501 aaPredicted RBP9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 COG7P83436 770 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 MAP3K11Q16584 847 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 DCLK2Q8N568 766 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 GOLGA6AQ9NYA3 693 aa9.94□□□□□ -0.82
SH3TC2-201ENST00000323829 KRT5P13647 590 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 LACTBP83111 547 aaPredicted RBP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 DBN1Q16643 649 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 CEP128Q6ZU80 1094 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 STMN4Q9H169 189 aaPredicted RBP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 NPR1P16066 1061 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 NOLC1Q14978 699 aaKnown RBP eCLIP9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 CLUL1Q15846 466 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 INF2Q27J81 1249 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 ZBTB3Q9H5J0 574 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 FAM204AQ9H8W3 233 aa9.93□□□□□ -0.82
SH3TC2-201ENST00000323829 ARHGEF11O15085 1522 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms