RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 LAMB2P55268 1798 aa23.82■■□□□ 1.4
PDZD3-201ENST00000322712 RTL9Q8NET4 1388 aa23.82■■□□□ 1.4
PDZD3-201ENST00000322712 HSP90B1P14625 803 aaKnown RBP23.82■■□□□ 1.4
PDZD3-201ENST00000322712 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
PDZD3-201ENST00000322712 DHX32Q7L7V1 743 aaKnown RBP23.82■■□□□ 1.4
PDZD3-201ENST00000322712 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
PDZD3-201ENST00000322712 TAF1LQ8IZX4 1826 aa23.81■■□□□ 1.4
PDZD3-201ENST00000322712 ZNF532Q9HCE3 1301 aa23.81■■□□□ 1.4
PDZD3-201ENST00000322712 F13A1P00488 732 aa23.81■■□□□ 1.4
PDZD3-201ENST00000322712 UQCRFS1P1P0C7P4 283 aa23.81■■□□□ 1.4
PDZD3-201ENST00000322712 VPS37CA5D8V6 355 aaPredicted RBP23.8■■□□□ 1.4
PDZD3-201ENST00000322712 FGD1P98174 961 aa23.8■■□□□ 1.4
PDZD3-201ENST00000322712 RC3H1Q5TC82 1133 aaKnown RBP23.8■■□□□ 1.4
PDZD3-201ENST00000322712 FAM43AQ8N2R8 423 aa23.8■■□□□ 1.4
PDZD3-201ENST00000322712 CNPY2Q9Y2B0 182 aa23.8■■□□□ 1.4
PDZD3-201ENST00000322712 GADD45BO75293 160 aaPredicted RBP23.8■■□□□ 1.4
PDZD3-201ENST00000322712 PHF14O94880 888 aa23.8■■□□□ 1.4
PDZD3-201ENST00000322712 PDE6AP16499 860 aa23.8■■□□□ 1.4
PDZD3-201ENST00000322712 EXOSC10Q01780 885 aaKnown RBP23.8■■□□□ 1.4
PDZD3-201ENST00000322712 TTF1Q15361 905 aaPredicted RBP23.8■■□□□ 1.4
PDZD3-201ENST00000322712 IQSEC3Q9UPP2 1182 aaPredicted RBP23.8■■□□□ 1.4
PDZD3-201ENST00000322712 ARAP2Q8WZ64 1704 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 JAK2O60674 1132 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 ARHGEF1Q92888 912 aaKnown RBP23.79■■□□□ 1.4
PDZD3-201ENST00000322712 ZPR1O75312 459 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 RXRBP28702 533 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 APOBRQ0VD83 1088 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 TPRNQ4KMQ1 711 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 USP48Q86UV5 1035 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 GTF3C6Q969F1 213 aa23.79■■□□□ 1.4
PDZD3-201ENST00000322712 RTCBQ9Y3I0 505 aaKnown RBP23.79■■□□□ 1.4
PDZD3-201ENST00000322712 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
PDZD3-201ENST00000322712 LARP1BQ659C4 914 aaKnown RBP23.78■■□□□ 1.4
PDZD3-201ENST00000322712 CELF1Q92879 486 aaKnown RBP23.78■■□□□ 1.4
PDZD3-201ENST00000322712 SETDB2Q96T68 719 aa23.78■■□□□ 1.4
PDZD3-201ENST00000322712 CDC5LQ99459 802 aaKnown RBP23.78■■□□□ 1.4
PDZD3-201ENST00000322712 GPHNQ9NQX3 736 aaPredicted RBP23.78■■□□□ 1.4
PDZD3-201ENST00000322712 TCRBV5S4A2TA0A5A2 114 aa23.78■■□□□ 1.4
PDZD3-201ENST00000322712 HMGB1P09429 215 aaKnown RBP23.78■■□□□ 1.4
PDZD3-201ENST00000322712 SF3B3Q15393 1217 aaKnown RBP23.78■■□□□ 1.4
PDZD3-201ENST00000322712 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
PDZD3-201ENST00000322712 LRRC4BQ9NT99 713 aa23.78■■□□□ 1.4
PDZD3-201ENST00000322712 CASZ1Q86V15 1759 aa23.77■■□□□ 1.4
PDZD3-201ENST00000322712 SCRN1Q12765 414 aa23.77■■□□□ 1.4
PDZD3-201ENST00000322712 ZSCAN23Q3MJ62 389 aa23.77■■□□□ 1.4
PDZD3-201ENST00000322712 CDC37L1Q7L3B6 337 aa23.77■■□□□ 1.4
PDZD3-201ENST00000322712 TMEM63CQ9P1W3 806 aa23.77■■□□□ 1.4
PDZD3-201ENST00000322712 ZSCAN25Q6NSZ9 544 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 NBPF5PQ86XG9 351 aaPredicted RBP23.76■■□□□ 1.39
PDZD3-201ENST00000322712 GRPEL1Q9HAV7 217 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 UBE3CQ15386 1083 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 IMMTQ16891 758 aaKnown RBP23.76■■□□□ 1.39
PDZD3-201ENST00000322712 FERMT3Q86UX7 667 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 MAGEB6Q8N7X4 407 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 FBXO41Q8TF61 875 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 CTNNA3Q9UI47 895 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 DENND2AQ9ULE3 1009 aa23.76■■□□□ 1.39
PDZD3-201ENST00000322712 C4BP0C0L5 1744 aa23.75■■□□□ 1.39
PDZD3-201ENST00000322712 PPFIA3O75145 1194 aa23.75■■□□□ 1.39
PDZD3-201ENST00000322712 GYG1P46976 350 aa23.75■■□□□ 1.39
PDZD3-201ENST00000322712 DNM1Q05193 864 aaKnown RBP23.75■■□□□ 1.39
PDZD3-201ENST00000322712 NKX2-3Q8TAU0 364 aa23.75■■□□□ 1.39
PDZD3-201ENST00000322712 DDX11Q96FC9 970 aa23.75■■□□□ 1.39
PDZD3-201ENST00000322712 NBPF3Q9H094 633 aa23.75■■□□□ 1.39
PDZD3-201ENST00000322712 APPP05067 770 aa23.74■■□□□ 1.39
PDZD3-201ENST00000322712 NAP1L2Q9ULW6 460 aaPredicted RBP23.74■■□□□ 1.39
PDZD3-201ENST00000322712 MINPP1Q9UNW1 487 aa23.74■■□□□ 1.39
PDZD3-201ENST00000322712 CCT2P78371 535 aaKnown RBP23.74■■□□□ 1.39
PDZD3-201ENST00000322712 SLC10A5Q5PT55 438 aa23.74■■□□□ 1.39
PDZD3-201ENST00000322712 FAM173BQ6P4H8 233 aa23.74■■□□□ 1.39
PDZD3-201ENST00000322712 FIBPO43427 364 aa23.73■■□□□ 1.39
PDZD3-201ENST00000322712 MRE11P49959 708 aa23.73■■□□□ 1.39
PDZD3-201ENST00000322712 NCOA5Q9HCD5 579 aaKnown RBP23.73■■□□□ 1.39
PDZD3-201ENST00000322712 BSDC1Q9NW68 430 aaPredicted RBP23.73■■□□□ 1.39
PDZD3-201ENST00000322712 RGS17Q9UGC6 210 aaPredicted RBP23.73■■□□□ 1.39
PDZD3-201ENST00000322712 ZNF213O14771 459 aa23.72■■□□□ 1.39
PDZD3-201ENST00000322712 AGXT2Q9BYV1 514 aa23.72■■□□□ 1.39
PDZD3-201ENST00000322712 STRBPQ96SI9 672 aaKnown RBP23.72■■□□□ 1.39
PDZD3-201ENST00000322712 PFKFB2O60825 505 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 SLC51AQ86UW1 340 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 AIDAQ96BJ3 306 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 RFC4P35249 363 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 MAP3K12Q12852 859 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 NYXQ9GZU5 481 aa23.71■■□□□ 1.39
PDZD3-201ENST00000322712 KLRK1P26718 216 aa23.7■■□□□ 1.38
PDZD3-201ENST00000322712 TBC1D10CQ8IV04 446 aa23.7■■□□□ 1.38
PDZD3-201ENST00000322712 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
PDZD3-201ENST00000322712 ARMT1Q9H993 441 aa23.7■■□□□ 1.38
PDZD3-201ENST00000322712 MBD4O95243 580 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 TRAPPC3LQ5T215 181 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 POTEAQ6S8J7 498 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 MB21D2Q8IYB1 491 aaPredicted RBP23.69■■□□□ 1.38
PDZD3-201ENST00000322712 INCENPQ9NQS7 918 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 PDIA3P30101 505 aaKnown RBP23.69■■□□□ 1.38
PDZD3-201ENST00000322712 ANTXR2P58335 489 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 ZNF445P59923 1031 aa23.69■■□□□ 1.38
PDZD3-201ENST00000322712 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
PDZD3-201ENST00000322712 A0A1B0GUL6 1792 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms