RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 SF3A1Q15459 793 aaKnown RBP29.42■■■□□ 2.3
SENP3-201ENST00000321337 ATL3Q6DD88 541 aa29.42■■■□□ 2.3
SENP3-201ENST00000321337 HELLSQ9NRZ9 838 aa29.42■■■□□ 2.3
SENP3-201ENST00000321337 ZNF274Q96GC6 653 aaPredicted RBP29.42■■■□□ 2.3
SENP3-201ENST00000321337 TAOK2Q9UL54 1235 aa29.42■■■□□ 2.3
SENP3-201ENST00000321337 KIF28PB7ZC32 967 aa29.41■■■□□ 2.3
SENP3-201ENST00000321337 ATP1A3P13637 1013 aa29.41■■■□□ 2.3
SENP3-201ENST00000321337 LMOD1P29536 600 aaPredicted RBP29.41■■■□□ 2.3
SENP3-201ENST00000321337 L2HGDHQ9H9P8 463 aa29.41■■■□□ 2.3
SENP3-201ENST00000321337 GORABQ5T7V8 394 aa29.41■■■□□ 2.3
SENP3-201ENST00000321337 ZNF594Q96JF6 807 aaPredicted RBP29.41■■■□□ 2.3
SENP3-201ENST00000321337 GOLGA8FQ08AF8 430 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 GOLGA8DPQ0D2H9 430 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 IMPACTQ9P2X3 320 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 A0A1W2PQ27 194 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 A0A1W2PQ64 194 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 A0A1W2PQD8 194 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 CCDC93Q567U6 631 aa29.4■■■□□ 2.3
SENP3-201ENST00000321337 SFPQP23246 707 aaKnown RBP eCLIP29.39■■■□□ 2.3
SENP3-201ENST00000321337 FOXO4P98177 505 aa29.39■■■□□ 2.3
SENP3-201ENST00000321337 LRRC24Q50LG9 513 aa29.39■■■□□ 2.3
SENP3-201ENST00000321337 ZNF202O95125 648 aa29.39■■■□□ 2.29
SENP3-201ENST00000321337 ZC3H6P61129 1189 aaKnown RBP29.39■■■□□ 2.29
SENP3-201ENST00000321337 HSP90AB3PQ58FF7 597 aa29.39■■■□□ 2.29
SENP3-201ENST00000321337 OSBP2Q969R2 916 aa29.39■■■□□ 2.29
SENP3-201ENST00000321337 SPTLC2O15270 562 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 FANCGO15287 622 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 DPF2Q92785 391 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 HSD3B7Q9H2F3 369 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 FOXP2O15409 715 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 SLC3A2P08195 630 aaKnown RBP29.38■■■□□ 2.29
SENP3-201ENST00000321337 H2AFXP16104 143 aaPredicted RBP29.38■■■□□ 2.29
SENP3-201ENST00000321337 C8orf76Q96K31 380 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 MROH7-TTC4A0A0A0MT08 1334 aa29.38■■■□□ 2.29
SENP3-201ENST00000321337 PHRF1Q9P1Y6 1649 aaKnown RBP29.38■■■□□ 2.29
SENP3-201ENST00000321337 ERICH4A6NGS2 130 aa29.37■■■□□ 2.29
SENP3-201ENST00000321337 ZRSR1Q15695 479 aaKnown RBP29.37■■■□□ 2.29
SENP3-201ENST00000321337 MARCKSP29966 332 aaPredicted RBP29.36■■■□□ 2.29
SENP3-201ENST00000321337 CLCN6P51797 869 aa29.36■■■□□ 2.29
SENP3-201ENST00000321337 MYSM1Q5VVJ2 828 aa29.36■■■□□ 2.29
SENP3-201ENST00000321337 HPS5Q9UPZ3 1129 aa29.36■■■□□ 2.29
SENP3-201ENST00000321337 ZBTB22O15209 634 aa29.36■■■□□ 2.29
SENP3-201ENST00000321337 RNF113AO15541 343 aaKnown RBP29.36■■■□□ 2.29
SENP3-201ENST00000321337 WDHD1O75717 1129 aaPredicted RBP29.36■■■□□ 2.29
SENP3-201ENST00000321337 NLRP12P59046 1061 aa29.36■■■□□ 2.29
SENP3-201ENST00000321337 AXDND1Q5T1B0 1012 aaPredicted RBP29.36■■■□□ 2.29
SENP3-201ENST00000321337 CCDC150Q8NCX0 1101 aa29.36■■■□□ 2.29
SENP3-201ENST00000321337 AFDNP55196 1824 aaKnown RBP29.36■■■□□ 2.29
SENP3-201ENST00000321337 PHKG2P15735 406 aa29.35■■■□□ 2.29
SENP3-201ENST00000321337 PFKFB1P16118 471 aa29.35■■■□□ 2.29
SENP3-201ENST00000321337 BPIFA3Q9BQP9 254 aa29.35■■■□□ 2.29
SENP3-201ENST00000321337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.35■■■□□ 2.29
SENP3-201ENST00000321337 FANCCQ00597 558 aa29.35■■■□□ 2.29
SENP3-201ENST00000321337 ORC3Q9UBD5 711 aaPredicted RBP29.35■■■□□ 2.29
SENP3-201ENST00000321337 KIF2AO00139 706 aaPredicted RBP29.34■■■□□ 2.29
SENP3-201ENST00000321337 IFIT1P09914 478 aaKnown RBP29.34■■■□□ 2.29
SENP3-201ENST00000321337 FBXO18Q8NFZ0 1043 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 AIFM3Q96NN9 605 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 FHOD1Q9Y613 1164 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 KLF18A0A0U1RQI7 1052 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 PSDA5PKW4 1024 aaPredicted RBP29.34■■■□□ 2.29
SENP3-201ENST00000321337 SNRPA1P09661 255 aaKnown RBP29.34■■■□□ 2.29
SENP3-201ENST00000321337 PUS3Q9BZE2 481 aaKnown RBP29.34■■■□□ 2.29
SENP3-201ENST00000321337 POLR3EQ9NVU0 708 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 NLRP2Q9NX02 1062 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 PODXL2Q9NZ53 605 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 DNAI1Q9UI46 699 aa29.34■■■□□ 2.29
SENP3-201ENST00000321337 KCNG4Q8TDN1 519 aa29.33■■■□□ 2.29
SENP3-201ENST00000321337 ADAMTS7Q9UKP4 1686 aa29.33■■■□□ 2.29
SENP3-201ENST00000321337 ARHGAP29Q52LW3 1261 aa29.33■■■□□ 2.29
SENP3-201ENST00000321337 HOMER1Q86YM7 354 aa29.33■■■□□ 2.29
SENP3-201ENST00000321337 NKX2-3Q8TAU0 364 aa29.33■■■□□ 2.29
SENP3-201ENST00000321337 DENND2AQ9ULE3 1009 aa29.33■■■□□ 2.29
SENP3-201ENST00000321337 GOLGA8BA8MQT2 603 aa29.32■■■□□ 2.28
SENP3-201ENST00000321337 FKBP4Q02790 459 aaKnown RBP eCLIP29.32■■■□□ 2.28
SENP3-201ENST00000321337 RAPGEF4Q8WZA2 1011 aa29.32■■■□□ 2.28
SENP3-201ENST00000321337 RGPD5Q99666 1765 aa29.32■■■□□ 2.28
SENP3-201ENST00000321337 YEATS4O95619 227 aa29.31■■■□□ 2.28
SENP3-201ENST00000321337 PRC1O43663 620 aa29.31■■■□□ 2.28
SENP3-201ENST00000321337 ANTXR2P58335 489 aa29.31■■■□□ 2.28
SENP3-201ENST00000321337 EPC1Q9H2F5 836 aa29.31■■■□□ 2.28
SENP3-201ENST00000321337 A0A1B0GUL7 405 aa29.3■■■□□ 2.28
SENP3-201ENST00000321337 EVCP57679 992 aa29.3■■■□□ 2.28
SENP3-201ENST00000321337 ANO1Q5XXA6 986 aa29.3■■■□□ 2.28
SENP3-201ENST00000321337 TTC5Q8N0Z6 440 aa29.3■■■□□ 2.28
SENP3-201ENST00000321337 TMEM232C9JQI7 657 aa29.29■■■□□ 2.28
SENP3-201ENST00000321337 TRIM65Q6PJ69 517 aa29.29■■■□□ 2.28
SENP3-201ENST00000321337 KIF23Q02241 960 aaPredicted RBP29.29■■■□□ 2.28
SENP3-201ENST00000321337 TTLL7Q6ZT98 887 aa29.29■■■□□ 2.28
SENP3-201ENST00000321337 H7C1W4 665 aa29.28■■■□□ 2.28
SENP3-201ENST00000321337 ETF1P62495 437 aaKnown RBP29.28■■■□□ 2.28
SENP3-201ENST00000321337 SLIT3O75094 1523 aa29.28■■■□□ 2.28
SENP3-201ENST00000321337 FGAP02671 866 aa29.28■■■□□ 2.28
SENP3-201ENST00000321337 PLA2G4AP47712 749 aa29.28■■■□□ 2.28
SENP3-201ENST00000321337 SYNE3Q6ZMZ3 975 aa29.28■■■□□ 2.28
SENP3-201ENST00000321337 NBPF26B4DH59 902 aa29.27■■■□□ 2.28
SENP3-201ENST00000321337 ADORA1P30542 326 aa29.27■■■□□ 2.28
SENP3-201ENST00000321337 PNOCQ13519 176 aa29.27■■■□□ 2.28
SENP3-201ENST00000321337 WASHC4Q2M389 1173 aa29.27■■■□□ 2.28
SENP3-201ENST00000321337 NBPF14Q5TI25 921 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms