RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.19■□□□□ 0.5
TUBA3D-201ENST00000321253 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
TUBA3D-201ENST00000321253 GGA3Q9NZ52 723 aa18.19■□□□□ 0.5
TUBA3D-201ENST00000321253 FAM205AQ6ZU69 1335 aa18.19■□□□□ 0.5
TUBA3D-201ENST00000321253 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 SCARF1Q14162 830 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 KRT26Q7Z3Y9 468 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 KLRG1Q96E93 195 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 BCAMP50895 628 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 USP48Q86UV5 1035 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 SULF1Q8IWU6 871 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 CERS5Q8N5B7 392 aa18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 IQSEC3Q9UPP2 1182 aaPredicted RBP18.18■□□□□ 0.5
TUBA3D-201ENST00000321253 F8W031 263 aaPredicted RBP18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 MFSD14BQ5SR56 506 aa18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 ANGEL2Q5VTE6 544 aaKnown RBP18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 ABT1Q9ULW3 272 aaKnown RBP18.17■□□□□ 0.5
TUBA3D-201ENST00000321253 ATP8B2P98198 1209 aa18.16■□□□□ 0.5
TUBA3D-201ENST00000321253 CHAF1AQ13111 956 aaPredicted RBP18.16■□□□□ 0.5
TUBA3D-201ENST00000321253 ZNF408Q9H9D4 720 aa18.16■□□□□ 0.5
TUBA3D-201ENST00000321253 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
TUBA3D-201ENST00000321253 TRPM7Q96QT4 1865 aa18.16■□□□□ 0.5
TUBA3D-201ENST00000321253 ASTN2O75129 1339 aaPredicted RBP18.16■□□□□ 0.5
TUBA3D-201ENST00000321253 CELF2O95319 508 aaKnown RBP18.15■□□□□ 0.5
TUBA3D-201ENST00000321253 TBC1D22AQ8WUA7 517 aa18.15■□□□□ 0.5
TUBA3D-201ENST00000321253 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
TUBA3D-201ENST00000321253 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
TUBA3D-201ENST00000321253 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
TUBA3D-201ENST00000321253 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
TUBA3D-201ENST00000321253 ADM5C9JUS6 153 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 WNT10BO00744 389 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 TFCP2Q12800 502 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 POLA2Q14181 598 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 DLGAP5Q15398 846 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 NBPF9Q3BBW0 867 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 SSH3Q8TE77 659 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 GNL3LQ9NVN8 582 aaKnown RBP18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 PITPNM2Q9BZ72 1349 aa18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.49
TUBA3D-201ENST00000321253 CST9Q5W186 159 aa18.13■□□□□ 0.49
TUBA3D-201ENST00000321253 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
TUBA3D-201ENST00000321253 TTF2Q9UNY4 1162 aaKnown RBP18.13■□□□□ 0.49
TUBA3D-201ENST00000321253 CNTNAP1P78357 1384 aa18.13■□□□□ 0.49
TUBA3D-201ENST00000321253 ARAP2Q8WZ64 1704 aa18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 A0A1B0GUL7 405 aa18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 SURF6O75683 361 aaKnown RBP18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 RBM5P52756 815 aaKnown RBP eCLIP18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 TIMM10P62072 90 aa18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 CFAP100Q494V2 611 aa18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 MTMR14Q8NCE2 650 aa18.12■□□□□ 0.49
TUBA3D-201ENST00000321253 MYH13Q9UKX3 1938 aa18.11■□□□□ 0.49
TUBA3D-201ENST00000321253 MYO1BO43795 1136 aa18.11■□□□□ 0.49
TUBA3D-201ENST00000321253 ADORA1P30542 326 aa18.11■□□□□ 0.49
TUBA3D-201ENST00000321253 DEFB115Q30KQ5 88 aa18.11■□□□□ 0.49
TUBA3D-201ENST00000321253 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
TUBA3D-201ENST00000321253 NEUROD6Q96NK8 337 aa18.11■□□□□ 0.49
TUBA3D-201ENST00000321253 RASSF10A6NK89 507 aa18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 PHKA1P46020 1223 aa18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 PAXIP1Q6ZW49 1069 aaPredicted RBP18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 APOBEC3FQ8IUX4 373 aaKnown RBP18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 CDCA5Q96FF9 252 aa18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 ZBED3Q96IU2 234 aaPredicted RBP18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
TUBA3D-201ENST00000321253 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 SEMA3EO15041 775 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 C20orf194Q5TEA3 1177 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 CCDC102BQ68D86 513 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 XAGE2Q96GT9 111 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 DENND2AQ9ULE3 1009 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 SUGT1Q9Y2Z0 365 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 MAST3O60307 1309 aa18.09■□□□□ 0.49
TUBA3D-201ENST00000321253 C2orf69Q8N8R5 385 aa18.08■□□□□ 0.49
TUBA3D-201ENST00000321253 ZBTB40Q9NUA8 1239 aa18.08■□□□□ 0.49
TUBA3D-201ENST00000321253 SCAF8Q9UPN6 1271 aaKnown RBP18.08■□□□□ 0.49
TUBA3D-201ENST00000321253 NOP58Q9Y2X3 529 aaKnown RBP18.08■□□□□ 0.49
TUBA3D-201ENST00000321253 SAPCD2Q86UD0 394 aa18.08■□□□□ 0.48
TUBA3D-201ENST00000321253 GBA2Q9HCG7 927 aaPredicted RBP18.08■□□□□ 0.48
TUBA3D-201ENST00000321253 PCDHAC2Q9Y5I4 1007 aa18.08■□□□□ 0.48
TUBA3D-201ENST00000321253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.08■□□□□ 0.48
TUBA3D-201ENST00000321253 COL1A1P02452 1464 aaPredicted RBP18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 HMMRO75330 724 aa18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 CRKP46108 304 aa18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 VEGFBP49765 207 aa18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 GRIK5Q16478 980 aa18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 RPAP2Q8IXW5 612 aaPredicted RBP18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 TEKT1Q969V4 418 aa18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 PRMT6Q96LA8 375 aaPredicted RBP18.07■□□□□ 0.48
TUBA3D-201ENST00000321253 CLRN2A0PK11 232 aa18.06■□□□□ 0.48
TUBA3D-201ENST00000321253 ECE1P42892 770 aa18.06■□□□□ 0.48
TUBA3D-201ENST00000321253 HDLBPQ00341 1268 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms