RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 ERLIN2O94905 339 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 MNAT1P51948 309 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 NDUFA8P51970 172 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 CASP8Q14790 479 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 SRGAP1Q7Z6B7 1085 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 MSANTD4Q8NCY6 345 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 NECTIN2Q92692 538 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
RTL3-201ENST00000321110 ALKQ9UM73 1620 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 LRRIQ3A6PVS8 624 aaPredicted RBP9.16□□□□□ -0.94
RTL3-201ENST00000321110 VSNL1P62760 191 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 VSTM4Q8IW00 320 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 CCDC12Q8WUD4 166 aaPredicted RBP9.16□□□□□ -0.94
RTL3-201ENST00000321110 MRPS27Q92552 414 aaKnown RBP9.16□□□□□ -0.94
RTL3-201ENST00000321110 STK31Q9BXU1 1019 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 TSPYL4Q9UJ04 414 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 PCDHA7Q9UN72 937 aa9.16□□□□□ -0.94
RTL3-201ENST00000321110 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
RTL3-201ENST00000321110 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.94
RTL3-201ENST00000321110 TDO2P48775 406 aa9.15□□□□□ -0.94
RTL3-201ENST00000321110 UBASH3AP57075 661 aa9.15□□□□□ -0.94
RTL3-201ENST00000321110 NMIQ13287 307 aaPredicted RBP9.15□□□□□ -0.94
RTL3-201ENST00000321110 KARSQ15046 597 aaKnown RBP9.15□□□□□ -0.94
RTL3-201ENST00000321110 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
RTL3-201ENST00000321110 SIL1Q9H173 461 aa9.15□□□□□ -0.94
RTL3-201ENST00000321110 TFRCP02786 760 aaKnown RBP9.15□□□□□ -0.95
RTL3-201ENST00000321110 NLRP12P59046 1061 aa9.15□□□□□ -0.95
RTL3-201ENST00000321110 HSP90B2PQ58FF3 399 aa9.15□□□□□ -0.95
RTL3-201ENST00000321110 ERC1Q8IUD2 1116 aa9.15□□□□□ -0.95
RTL3-201ENST00000321110 DESI2Q9BSY9 194 aa9.15□□□□□ -0.95
RTL3-201ENST00000321110 INTS13Q9NVM9 706 aa9.15□□□□□ -0.95
RTL3-201ENST00000321110 GOLGA6L9A6NEM1 432 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 RNF40O75150 1001 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 ERLIN1O75477 346 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 TOP1P11387 765 aaKnown RBP9.14□□□□□ -0.95
RTL3-201ENST00000321110 CFAP100Q494V2 611 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 MRPL44Q9H9J2 332 aaKnown RBP9.14□□□□□ -0.95
RTL3-201ENST00000321110 ABCC6O95255 1503 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 A0A0D9SFI3 127 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 IKBKBO14920 756 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 FOXO3O43524 673 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 PRPF6O94906 941 aaKnown RBP9.14□□□□□ -0.95
RTL3-201ENST00000321110 SERPINC1P01008 464 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 RHOXF2BP0C7M4 288 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 SCRN1Q12765 414 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 EIF4A2Q14240 407 aaKnown RBP9.14□□□□□ -0.95
RTL3-201ENST00000321110 NAA16Q6N069 864 aaPredicted RBP9.14□□□□□ -0.95
RTL3-201ENST00000321110 EGFL6Q8IUX8 553 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 SMARCC2Q8TAQ2 1214 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 BAG1Q99933 345 aaPredicted RBP9.14□□□□□ -0.95
RTL3-201ENST00000321110 RHOXF2Q9BQY4 288 aa9.14□□□□□ -0.95
RTL3-201ENST00000321110 SYF2O95926 243 aaKnown RBP9.13□□□□□ -0.95
RTL3-201ENST00000321110 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 PLPPR3Q6T4P5 718 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 AFAP1L1Q8TED9 768 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 EVI5LQ96CN4 794 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 ECHDC1Q9NTX5 307 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 A0A0U1RQJ8 604 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 POTEB2H3BUK9 544 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
RTL3-201ENST00000321110 SCP2P22307 547 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 MTX1Q13505 466 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 ADALQ6DHV7 355 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 NSUN7Q8NE18 718 aaKnown RBP9.13□□□□□ -0.95
RTL3-201ENST00000321110 ATRIPQ8WXE1 791 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 ZNF396Q96N95 335 aaPredicted RBP9.13□□□□□ -0.95
RTL3-201ENST00000321110 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
RTL3-201ENST00000321110 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 FAM169AQ9Y6X4 670 aa9.13□□□□□ -0.95
RTL3-201ENST00000321110 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 A0A1W2PQD8 194 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 PPFIA3O75145 1194 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 CTDNEP1O95476 244 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 NBPF7P0C2Y1 421 aaPredicted RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 CCT5P48643 541 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 GUCY1B3Q02153 619 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 TBX2Q13207 712 aaPredicted RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 MTF1Q14872 753 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 Q6ZUG5 572 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 ZNF589Q86UQ0 364 aaPredicted RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 TC2NQ8N9U0 490 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 FAM107BQ9H098 131 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 CDC23Q9UJX2 597 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 CBFA2T2O43439 604 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 STX10O60499 249 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 HSP90B1P14625 803 aaKnown RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 ADKP55263 362 aaKnown RBP9.12□□□□□ -0.95
RTL3-201ENST00000321110 NUTM2GQ5VZR2 741 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 RPAINQ86UA6 219 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 CEP112Q8N8E3 955 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 LRRC2Q9BYS8 371 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
RTL3-201ENST00000321110 AARSP49588 968 aaKnown RBP eCLIP9.11□□□□□ -0.95
RTL3-201ENST00000321110 ATL3Q6DD88 541 aa9.11□□□□□ -0.95
RTL3-201ENST00000321110 JPH2Q9BR39 696 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms