RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
PRPF18-201ENST00000320054 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
PRPF18-201ENST00000320054 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
PRPF18-201ENST00000320054 RFX7Q2KHR2 1363 aa16.52■□□□□ 0.24
PRPF18-201ENST00000320054 NFKBIEO00221 500 aa16.52■□□□□ 0.24
PRPF18-201ENST00000320054 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
PRPF18-201ENST00000320054 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
PRPF18-201ENST00000320054 RILPL2Q969X0 211 aa16.52■□□□□ 0.24
PRPF18-201ENST00000320054 FAM205AQ6ZU69 1335 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 GOLIM4O00461 696 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 PPIP5K2O43314 1243 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 IGSF3O75054 1194 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 FRAT2O75474 233 aaPredicted RBP16.51■□□□□ 0.23
PRPF18-201ENST00000320054 CYP2E1P05181 493 aaPredicted RBP16.51■□□□□ 0.23
PRPF18-201ENST00000320054 AOC3Q16853 763 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
PRPF18-201ENST00000320054 IQSEC3Q9UPP2 1182 aaPredicted RBP16.51■□□□□ 0.23
PRPF18-201ENST00000320054 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 G3V3G9 751 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 CDC45O75419 566 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
PRPF18-201ENST00000320054 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
PRPF18-201ENST00000320054 ZNF277Q9NRM2 450 aaPredicted RBP16.5■□□□□ 0.23
PRPF18-201ENST00000320054 NDUFB9Q9Y6M9 179 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 COL4A5P29400 1685 aa16.5■□□□□ 0.23
PRPF18-201ENST00000320054 HIP1O00291 1037 aa16.49■□□□□ 0.23
PRPF18-201ENST00000320054 DOK7Q18PE1 504 aa16.49■□□□□ 0.23
PRPF18-201ENST00000320054 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
PRPF18-201ENST00000320054 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
PRPF18-201ENST00000320054 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
PRPF18-201ENST00000320054 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
PRPF18-201ENST00000320054 ECE2O60344 883 aa16.48■□□□□ 0.23
PRPF18-201ENST00000320054 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
PRPF18-201ENST00000320054 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
PRPF18-201ENST00000320054 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
PRPF18-201ENST00000320054 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
PRPF18-201ENST00000320054 MYH2Q9UKX2 1941 aa16.48■□□□□ 0.23
PRPF18-201ENST00000320054 YBX3P16989 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRPF18-201ENST00000320054 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
PRPF18-201ENST00000320054 SPTY2D1Q68D10 685 aaPredicted RBP16.47■□□□□ 0.23
PRPF18-201ENST00000320054 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
PRPF18-201ENST00000320054 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRPF18-201ENST00000320054 TIAM2Q8IVF5 1701 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
PRPF18-201ENST00000320054 CHMLP26374 656 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
PRPF18-201ENST00000320054 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 C8orf34Q49A92 452 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 CASC1Q6TDU7 716 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 TBC1D9Q6ZT07 1266 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 ARHGAP27Q6ZUM4 889 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
PRPF18-201ENST00000320054 GTF2IP78347 998 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 RASSF7Q02833 373 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 TTLL5Q6EMB2 1281 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
PRPF18-201ENST00000320054 USP17L3A6NCW0 530 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 USP17L4A6NCW7 530 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 YDJCA8MPS7 323 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
PRPF18-201ENST00000320054 EIF5BO60841 1220 aaKnown RBP16.44■□□□□ 0.22
PRPF18-201ENST00000320054 IDH1O75874 414 aaKnown RBP16.44■□□□□ 0.22
PRPF18-201ENST00000320054 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 USP17L1Q7RTZ2 530 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
PRPF18-201ENST00000320054 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 LMNB1P20700 586 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 ADD2P35612 726 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 PRELPP51888 382 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
PRPF18-201ENST00000320054 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
PRPF18-201ENST00000320054 PDE6AP16499 860 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 GPR162Q16538 588 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 SLC9C2Q5TAH2 1124 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 BACH2Q9BYV9 841 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 KCNQ5Q9NR82 932 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 HELLSQ9NRZ9 838 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 RAD50Q92878 1312 aa16.42■□□□□ 0.22
PRPF18-201ENST00000320054 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
PRPF18-201ENST00000320054 TCRBV5S4A2TA0A5A2 114 aa16.41■□□□□ 0.22
PRPF18-201ENST00000320054 PRDX5P30044 214 aa16.41■□□□□ 0.22
PRPF18-201ENST00000320054 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
PRPF18-201ENST00000320054 APPBP2Q92624 585 aa16.41■□□□□ 0.22
PRPF18-201ENST00000320054 NSUN4Q96CB9 384 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms