RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 EIF5BO60841 1220 aaKnown RBP33.2■■■□□ 2.91
CTDNEP1-201ENST00000318988 CHAF1AQ13111 956 aaPredicted RBP33.2■■■□□ 2.91
CTDNEP1-201ENST00000318988 TICAM2Q86XR7 235 aa33.2■■■□□ 2.91
CTDNEP1-201ENST00000318988 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.2■■■□□ 2.914e-6■□□□□ 11.1
CTDNEP1-201ENST00000318988 SNED1Q8TER0 1413 aa33.2■■■□□ 2.91
CTDNEP1-201ENST00000318988 IL1R1P14778 569 aa33.19■■■□□ 2.9
CTDNEP1-201ENST00000318988 CHMLP26374 656 aa33.19■■■□□ 2.9
CTDNEP1-201ENST00000318988 BRCA1P38398 1863 aaKnown RBP33.19■■■□□ 2.9
CTDNEP1-201ENST00000318988 AK9Q5TCS8 1911 aa33.18■■■□□ 2.9
CTDNEP1-201ENST00000318988 PPIP5K2O43314 1243 aa33.18■■■□□ 2.9
CTDNEP1-201ENST00000318988 DOK7Q18PE1 504 aa33.18■■■□□ 2.9
CTDNEP1-201ENST00000318988 RFX7Q2KHR2 1363 aa33.17■■■□□ 2.9
CTDNEP1-201ENST00000318988 KIAA2012Q0VF49 1180 aa33.17■■■□□ 2.9
CTDNEP1-201ENST00000318988 ZSCAN25Q6NSZ9 544 aa33.17■■■□□ 2.9
CTDNEP1-201ENST00000318988 RUFY2Q8WXA3 655 aa33.17■■■□□ 2.9
CTDNEP1-201ENST00000318988 VPS33BQ9H267 617 aa33.17■■■□□ 2.9
CTDNEP1-201ENST00000318988 IDH1O75874 414 aaKnown RBP33.16■■■□□ 2.9
CTDNEP1-201ENST00000318988 AOC3Q16853 763 aa33.16■■■□□ 2.9
CTDNEP1-201ENST00000318988 WDR66Q8TBY9 1149 aa33.16■■■□□ 2.9
CTDNEP1-201ENST00000318988 PIH1D3Q9NQM4 214 aaKnown RBP33.16■■■□□ 2.9
CTDNEP1-201ENST00000318988 LRP2BPQ9P2M1 347 aa33.16■■■□□ 2.9
CTDNEP1-201ENST00000318988 AKAP11Q9UKA4 1901 aa33.15■■■□□ 2.9
CTDNEP1-201ENST00000318988 MAP3K12Q12852 859 aa33.15■■■□□ 2.9
CTDNEP1-201ENST00000318988 TAOK3Q9H2K8 898 aa33.15■■■□□ 2.9
CTDNEP1-201ENST00000318988 ABCF2Q9UG63 623 aa33.15■■■□□ 2.9
CTDNEP1-201ENST00000318988 ZFYP08048 801 aaPredicted RBP33.14■■■□□ 2.9
CTDNEP1-201ENST00000318988 ZGPATQ8N5A5 531 aaKnown RBP33.14■■■□□ 2.9
CTDNEP1-201ENST00000318988 PODNQ7Z5L7 613 aa33.13■■■□□ 2.89
CTDNEP1-201ENST00000318988 COL1A1P02452 1464 aaPredicted RBP33.13■■■□□ 2.89
CTDNEP1-201ENST00000318988 CWC27Q6UX04 472 aaKnown RBP33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 DBNDD1Q9H9R9 158 aa33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 ZNF277Q9NRM2 450 aaPredicted RBP33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 RNF113AO15541 343 aaKnown RBP33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 SPTY2D1Q68D10 685 aaPredicted RBP33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 LARGE2Q8N3Y3 721 aa33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 JAG2Q9Y219 1238 aa33.12■■■□□ 2.89
CTDNEP1-201ENST00000318988 FBXW7Q969H0 707 aa33.11■■■□□ 2.89
CTDNEP1-201ENST00000318988 ECE2O60344 883 aa33.1■■■□□ 2.89
CTDNEP1-201ENST00000318988 TBC1D22AQ8WUA7 517 aa33.1■■■□□ 2.89
CTDNEP1-201ENST00000318988 ESYT1Q9BSJ8 1104 aa33.1■■■□□ 2.89
CTDNEP1-201ENST00000318988 RAI14Q9P0K7 980 aa33.1■■■□□ 2.89
CTDNEP1-201ENST00000318988 IARSP41252 1262 aaKnown RBP33.09■■■□□ 2.89
CTDNEP1-201ENST00000318988 NMIQ13287 307 aaPredicted RBP33.09■■■□□ 2.89
CTDNEP1-201ENST00000318988 SLC9C2Q5TAH2 1124 aa33.09■■■□□ 2.89
CTDNEP1-201ENST00000318988 ERICH6Q7L0X2 663 aa33.09■■■□□ 2.89
CTDNEP1-201ENST00000318988 UPF2Q9HAU5 1272 aaKnown RBP33.09■■■□□ 2.89
CTDNEP1-201ENST00000318988 GTF2IP78347 998 aa33.08■■■□□ 2.89
CTDNEP1-201ENST00000318988 SALL1Q9NSC2 1324 aa33.08■■■□□ 2.89
CTDNEP1-201ENST00000318988 MYH13Q9UKX3 1938 aa33.08■■■□□ 2.89
CTDNEP1-201ENST00000318988 MFAP1P55081 439 aaKnown RBP33.07■■■□□ 2.89
CTDNEP1-201ENST00000318988 FAM205AQ6ZU69 1335 aa33.07■■■□□ 2.89
CTDNEP1-201ENST00000318988 NFKBIEO00221 500 aa33.07■■■□□ 2.88
CTDNEP1-201ENST00000318988 TTLL5Q6EMB2 1281 aa33.07■■■□□ 2.88
CTDNEP1-201ENST00000318988 FAM227BQ96M60 508 aa33.07■■■□□ 2.88
CTDNEP1-201ENST00000318988 LTBP3Q9NS15 1303 aa33.07■■■□□ 2.88
CTDNEP1-201ENST00000318988 REC8O95072 547 aa33.06■■■□□ 2.88
CTDNEP1-201ENST00000318988 NIM1KQ8IY84 436 aa33.06■■■□□ 2.88
CTDNEP1-201ENST00000318988 LDHBP07195 334 aaKnown RBP33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 PDE6AP16499 860 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 ADD2P35612 726 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 ARHGAP27Q6ZUM4 889 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 MAGEB6Q8N7X4 407 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 HELLSQ9NRZ9 838 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 RAD50Q92878 1312 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 ARFGEF1Q9Y6D6 1849 aa33.05■■■□□ 2.88
CTDNEP1-201ENST00000318988 IGSF3O75054 1194 aa33.04■■■□□ 2.88
CTDNEP1-201ENST00000318988 UBE3CQ15386 1083 aa33.04■■■□□ 2.88
CTDNEP1-201ENST00000318988 MFSD14BQ5SR56 506 aa33.04■■■□□ 2.88
CTDNEP1-201ENST00000318988 A0A0D9SFI3 127 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 SGSM2O43147 1006 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 SEC24BO95487 1268 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 MCMDC2Q4G0Z9 681 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 ZMYM1Q5SVZ6 1142 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 KIAA1211Q6ZU35 1233 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 JDP2Q8WYK2 163 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 APPBP2Q92624 585 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 ZNF532Q9HCE3 1301 aa33.03■■■□□ 2.88
CTDNEP1-201ENST00000318988 DZIP1Q86YF9 867 aaKnown RBP33.02■■■□□ 2.88
CTDNEP1-201ENST00000318988 FER1L6Q2WGJ9 1857 aa33.02■■■□□ 2.88
CTDNEP1-201ENST00000318988 USP17L3A6NCW0 530 aa33.02■■■□□ 2.88
CTDNEP1-201ENST00000318988 USP17L4A6NCW7 530 aa33.02■■■□□ 2.88
CTDNEP1-201ENST00000318988 USP17L1Q7RTZ2 530 aa33.02■■■□□ 2.88
CTDNEP1-201ENST00000318988 PRDX5P30044 214 aa33.01■■■□□ 2.87
CTDNEP1-201ENST00000318988 RASSF7Q02833 373 aa33.01■■■□□ 2.87
CTDNEP1-201ENST00000318988 STRIP1Q5VSL9 837 aa33.01■■■□□ 2.87
CTDNEP1-201ENST00000318988 NAA16Q6N069 864 aaPredicted RBP33.01■■■□□ 2.87
CTDNEP1-201ENST00000318988 TMED8Q6PL24 325 aaPredicted RBP33.01■■■□□ 2.87
CTDNEP1-201ENST00000318988 CHGBP05060 677 aa33■■■□□ 2.87
CTDNEP1-201ENST00000318988 ANO2Q9NQ90 1003 aa33■■■□□ 2.87
CTDNEP1-201ENST00000318988 ZNRF3Q9ULT6 936 aa33■■■□□ 2.87
CTDNEP1-201ENST00000318988 CYP7A1P22680 504 aa32.99■■■□□ 2.87
CTDNEP1-201ENST00000318988 SLFNL1Q499Z3 407 aa32.99■■■□□ 2.87
CTDNEP1-201ENST00000318988 SUGT1Q9Y2Z0 365 aa32.99■■■□□ 2.87
CTDNEP1-201ENST00000318988 DOCK2Q92608 1830 aa32.98■■■□□ 2.87
CTDNEP1-201ENST00000318988 GSTO1P78417 241 aa32.98■■■□□ 2.87
CTDNEP1-201ENST00000318988 MECOMQ03112 1051 aa32.98■■■□□ 2.87
CTDNEP1-201ENST00000318988 NSUN4Q96CB9 384 aaKnown RBP32.97■■■□□ 2.87
CTDNEP1-201ENST00000318988 SEC62Q99442 399 aaKnown RBP32.97■■■□□ 2.87
CTDNEP1-201ENST00000318988 KCNQ5Q9NR82 932 aa32.97■■■□□ 2.87
CTDNEP1-201ENST00000318988 TCRBV5S4A2TA0A5A2 114 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms