RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 MRFAP1L1Q96HT8 127 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 SUGCTQ9HAC7 445 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 FANCLQ9NW38 375 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 VPS18Q9P253 973 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 DENND2AQ9ULE3 1009 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 AATKQ6ZMQ8 1374 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 MCMDC2Q4G0Z9 681 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 RALYLQ86SE5 291 aaKnown RBP16.43■□□□□ 0.22
PABPC1-201ENST00000318607 STAMQ92783 540 aa16.43■□□□□ 0.22
PABPC1-201ENST00000318607 ZSCAN16Q9H4T2 348 aaPredicted RBP16.43■□□□□ 0.22
PABPC1-201ENST00000318607 ELP1O95163 1332 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
PABPC1-201ENST00000318607 FOXN1O15353 648 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 KIAA1468Q9P260 1216 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 AOX1Q06278 1338 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 EEF2KMTQ96G04 330 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 INCENPQ9NQS7 918 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 RSPH14Q9UHP6 348 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 CASQ1P31415 396 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 NYAP1Q6ZVC0 841 aa16.42■□□□□ 0.22
PABPC1-201ENST00000318607 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
PABPC1-201ENST00000318607 IPO4Q8TEX9 1081 aaKnown RBP16.42■□□□□ 0.22
PABPC1-201ENST00000318607 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 CAPN2P17655 700 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
PABPC1-201ENST00000318607 KRT32Q14532 448 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 KAZALD1Q96I82 304 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 WDR24Q96S15 920 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 SYKP43405 635 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 PLA2G4AP47712 749 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 GSDMDP57764 484 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 MTF1Q14872 753 aa16.41■□□□□ 0.22
PABPC1-201ENST00000318607 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
PABPC1-201ENST00000318607 SMC1AQ14683 1233 aaKnown RBP16.4■□□□□ 0.22
PABPC1-201ENST00000318607 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 STRCQ7RTU9 1775 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 hCG_1642624A0A1W2PR95 340 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 NEMFO60524 1076 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 CASP1P29466 404 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 RAD51AP2Q09MP3 1159 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 TNNI3KQ59H18 835 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 FHOD1Q9Y613 1164 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 FPGT-TNNI3KV9GXZ4 949 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 ADCY9O60503 1353 aa16.4■□□□□ 0.22
PABPC1-201ENST00000318607 CTAGE5O15320 804 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 TAF3Q5VWG9 929 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 LINS1Q8NG48 757 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 LCMT1Q9UIC8 334 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
PABPC1-201ENST00000318607 A0A0U1RQJ8 604 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 E7EWF7 191 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
PABPC1-201ENST00000318607 PFKFB1P16118 471 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 AFMP43652 599 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 ATRIPQ8WXE1 791 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 GPS2Q13227 327 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
PABPC1-201ENST00000318607 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
PABPC1-201ENST00000318607 IGKV5-2P06315 115 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 PDIA3P30101 505 aaKnown RBP16.38■□□□□ 0.21
PABPC1-201ENST00000318607 ZKSCAN3Q9BRR0 538 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
PABPC1-201ENST00000318607 ZSCAN26Q16670 478 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 ARFGAP3Q9NP61 516 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 TECPR2O15040 1411 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 KIF4BQ2VIQ3 1234 aa16.38■□□□□ 0.21
PABPC1-201ENST00000318607 MRPS25P82663 173 aaKnown RBP16.37■□□□□ 0.21
PABPC1-201ENST00000318607 TOGARAM2Q6ZUX3 1019 aa16.37■□□□□ 0.21
PABPC1-201ENST00000318607 ZMYND10O75800 440 aa16.37■□□□□ 0.21
PABPC1-201ENST00000318607 SASH3O75995 380 aa16.37■□□□□ 0.21
PABPC1-201ENST00000318607 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
PABPC1-201ENST00000318607 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
PABPC1-201ENST00000318607 HMG20BQ9P0W2 317 aa16.37■□□□□ 0.21
PABPC1-201ENST00000318607 PRC1O43663 620 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
PABPC1-201ENST00000318607 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
PABPC1-201ENST00000318607 DHX58Q96C10 678 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 MAPK8IP1Q9UQF2 711 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 MST1RQ04912 1400 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 KIF28PB7ZC32 967 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 LRRC24Q50LG9 513 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 PAG1Q9NWQ8 432 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 N4BP1O75113 896 aaKnown RBP16.36■□□□□ 0.21
PABPC1-201ENST00000318607 SMYD4Q8IYR2 804 aaPredicted RBP16.36■□□□□ 0.21
PABPC1-201ENST00000318607 NUP133Q8WUM0 1156 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
PABPC1-201ENST00000318607 PDE11AQ9HCR9 933 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
PABPC1-201ENST00000318607 DNAJC21Q5F1R6 531 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms