RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 FANCCQ00597 558 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 ATRNO75882 1429 aa11.2□□□□□ -0.62
PTPRA-202ENST00000318266 ITSN1Q15811 1721 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 TADA3O75528 432 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 SMC1AQ14683 1233 aaKnown RBP11.19□□□□□ -0.62
PTPRA-202ENST00000318266 PDILTQ8N807 584 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 DBF4Q9UBU7 674 aaPredicted RBP11.19□□□□□ -0.62
PTPRA-202ENST00000318266 MARCKSP29966 332 aaPredicted RBP11.19□□□□□ -0.62
PTPRA-202ENST00000318266 GNG11P61952 73 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 NAA16Q6N069 864 aaPredicted RBP11.19□□□□□ -0.62
PTPRA-202ENST00000318266 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 RSPH14Q9UHP6 348 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 RGPD1P0DJD0 1748 aa11.19□□□□□ -0.62
PTPRA-202ENST00000318266 TMEM232C9JQI7 657 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 TBC1D8O95759 1140 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 TRIM65Q6PJ69 517 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 DBNLQ9UJU6 430 aaKnown RBP11.18□□□□□ -0.62
PTPRA-202ENST00000318266 PFKFB2O60825 505 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 MYL6BP14649 208 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 UBASH3AP57075 661 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 WDR24Q96S15 920 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-202ENST00000318266 EPHA10Q5JZY3 1008 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 ABTB2Q8N961 1025 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 ALDH8A1Q9H2A2 487 aaPredicted RBP11.18□□□□□ -0.62
PTPRA-202ENST00000318266 PARP3Q9Y6F1 533 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 NRXN3Q9Y4C0 1643 aa11.18□□□□□ -0.62
PTPRA-202ENST00000318266 ZNF202O95125 648 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 TFCP2Q12800 502 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 CC2D1AQ6P1N0 951 aaPredicted RBP11.17□□□□□ -0.62
PTPRA-202ENST00000318266 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
PTPRA-202ENST00000318266 TXLNBQ8N3L3 684 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
PTPRA-202ENST00000318266 NCAPHQ15003 741 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 KARSQ15046 597 aaKnown RBP11.17□□□□□ -0.62
PTPRA-202ENST00000318266 LRRFIP1Q32MZ4 808 aaKnown RBP11.17□□□□□ -0.62
PTPRA-202ENST00000318266 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 DHX32Q7L7V1 743 aaKnown RBP11.17□□□□□ -0.62
PTPRA-202ENST00000318266 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 ZNF609O15014 1411 aa11.17□□□□□ -0.62
PTPRA-202ENST00000318266 GPS2Q13227 327 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 USPL1Q5W0Q7 1092 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 DESI2Q9BSY9 194 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 NALCNQ8IZF0 1738 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 KIF1AQ12756 1690 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 EFCAB8A8MWE9 144 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 TOP1P11387 765 aaKnown RBP11.16□□□□□ -0.62
PTPRA-202ENST00000318266 HAND2P61296 217 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 MCM6Q14566 821 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 MCMDC2Q4G0Z9 681 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 CREBRFQ8IUR6 639 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 STK11IPQ8N1F8 1099 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 LINC00301Q8NCQ3 95 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 ARFGAP3Q9NP61 516 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 AKAP12Q02952 1782 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 PHLPP2Q6ZVD8 1323 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 SPTLC2O15270 562 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
PTPRA-202ENST00000318266 PARD6BQ9BYG5 372 aa11.16□□□□□ -0.62
PTPRA-202ENST00000318266 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
PTPRA-202ENST00000318266 AFF2P51816 1311 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 NWD2Q9ULI1 1742 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 MYO1CO00159 1063 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 GOLIM4O00461 696 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
PTPRA-202ENST00000318266 CASQ1P31415 396 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 NEUROD6Q96NK8 337 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 LLPHQ9BRT6 129 aaKnown RBP11.15□□□□□ -0.62
PTPRA-202ENST00000318266 RASSF4Q9H2L5 321 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 CARMIL3Q8ND23 1372 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 VWA3AA6NCI4 1184 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 ANKRD65E5RJM6 399 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
PTPRA-202ENST00000318266 PFKFB1P16118 471 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 ADKP55263 362 aaKnown RBP11.15□□□□□ -0.62
PTPRA-202ENST00000318266 NLRP12P59046 1061 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 CCDC158Q5M9N0 1113 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 C8orf76Q96K31 380 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 PPP2R2CQ9Y2T4 447 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 CRYBG1Q9Y4K1 1723 aa11.15□□□□□ -0.62
PTPRA-202ENST00000318266 H3BQF6 201 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 SLC20A2Q08357 652 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 PNOCQ13519 176 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 SYNE3Q6ZMZ3 975 aa11.14□□□□□ -0.63
PTPRA-202ENST00000318266 FANCLQ9NW38 375 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms