RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 RABEP1Q15276 862 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-201ENST00000318023 LCMT1Q9UIC8 334 aa11.08□□□□□ -0.64
CAPN3-201ENST00000318023 SMTNL1A8MU46 457 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 C6orf229H3BNL8 230 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 NFKBIEO00221 500 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-201ENST00000318023 TRIM27P14373 513 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 CT47A1Q5JQC4 288 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-201ENST00000318023 ZNF594Q96JF6 807 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-201ENST00000318023 TMX4Q9H1E5 349 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-201ENST00000318023 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 LRMPQ12912 555 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 GREM2Q9H772 168 aa11.07□□□□□ -0.64
CAPN3-201ENST00000318023 KDM4AO75164 1064 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 FAM193AP78312 1265 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 GCKRQ14397 625 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 ELF2Q15723 593 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 ZNF397Q8NF99 534 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 KLHDC4Q8TBB5 520 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 TAOK3Q9H2K8 898 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 GJA3Q9Y6H8 435 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 ABCC4O15439 1325 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 PPEF1O14829 653 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 NOL8Q76FK4 1167 aaKnown RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 FAM184AQ8NB25 1140 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 SRCIN1Q9C0H9 1055 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 GPBP1L1Q9HC44 474 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 EPHA10Q5JZY3 1008 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 CCDC191Q8NCU4 936 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
CAPN3-201ENST00000318023 CWC22Q9HCG8 908 aaKnown RBP11.06□□□□□ -0.64
CAPN3-201ENST00000318023 UVSSAQ2YD98 709 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 ICE2Q659A1 982 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-201ENST00000318023 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-201ENST00000318023 SYCP1Q15431 976 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 LMBR1LQ6UX01 489 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 KRBA2Q6ZNG9 492 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 MYCBPQ99417 103 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-201ENST00000318023 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 JAG2Q9Y219 1238 aa11.05□□□□□ -0.64
CAPN3-201ENST00000318023 MYO1CO00159 1063 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 AOC3Q16853 763 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 BEND3Q5T5X7 828 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 LINS1Q8NG48 757 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 SART3Q15020 963 aaKnown RBP11.04□□□□□ -0.64
CAPN3-201ENST00000318023 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 TMEM57Q8N5G2 664 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 DRC1Q96MC2 740 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-201ENST00000318023 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 TAF5LO75529 589 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-201ENST00000318023 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 DPP8Q6V1X1 898 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-201ENST00000318023 SIL1Q9H173 461 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 DDX19BQ9UMR2 479 aa11.04□□□□□ -0.64
CAPN3-201ENST00000318023 PPIP5K2O43314 1243 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 NCAPGQ9BPX3 1015 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 DBNDD1Q9H9R9 158 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
CAPN3-201ENST00000318023 G3V3G9 751 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 PCCAP05165 728 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-201ENST00000318023 RPS8P62241 208 aaKnown RBP11.03□□□□□ -0.64
CAPN3-201ENST00000318023 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 STYK1Q6J9G0 422 aa11.03□□□□□ -0.64
CAPN3-201ENST00000318023 GRM8O00222 908 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 PDE8AO60658 829 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 CDC45O75419 566 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 ITGA6P23229 1130 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 CASQ1P31415 396 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 USP48Q86UV5 1035 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 SUCLG2Q96I99 432 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 RRAGCQ9HB90 399 aa11.02□□□□□ -0.64
CAPN3-201ENST00000318023 ST18O60284 1047 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 RAD17O75943 681 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 CTSWP56202 376 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 CCDC152Q4G0S7 254 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 AXDND1Q5T1B0 1012 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-201ENST00000318023 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 FAM53CQ9NYF3 392 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 AFDNP55196 1824 aaKnown RBP11.02□□□□□ -0.65
CAPN3-201ENST00000318023 LMNB1P20700 586 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 TPD52L1Q16890 204 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-201ENST00000318023 CRY2Q49AN0 593 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 TTLL11Q8NHH1 800 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 KIF1BPQ96EK5 621 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 MPHOSPH8Q99549 860 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 MEIS3Q99687 375 aa11.02□□□□□ -0.65
CAPN3-201ENST00000318023 TCHHQ07283 1943 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms