RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 DOCK9Q9BZ29 2069 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 GOLGA6CA6NDK9 693 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 GOLGA6DP0CG33 693 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TNNC1P63316 161 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TEFQ10587 303 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TMTC1Q8IUR5 882 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 ANKRD44Q8N8A2 993 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 CALR3Q96L12 384 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 GOLGA6AQ9NYA3 693 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 NUP153P49790 1475 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 STAMBPO95630 424 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 AMPD3Q01432 767 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 MAP3K21Q5TCX8 1036 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 NAA16Q6N069 864 aaPredicted RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TCP11Q8WWU5 503 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TSC1Q92574 1164 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC114Q96M63 670 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 FAM210AQ96ND0 272 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 CLSTN2Q9H4D0 955 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 BMP2KQ9NSY1 1161 aaPredicted RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 BCAP29Q9UHQ4 241 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TACC1O75410 805 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 BRD1O95696 1058 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 DESP17661 470 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 IFT20Q8IY31 132 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 DHX37Q8IY37 1157 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 MICALL1Q8N3F8 863 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 SREK1Q8WXA9 508 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TESK2Q96S53 571 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 GGNBP2Q9H3C7 697 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 CNOT10Q9H9A5 744 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 VIPAS39Q9H9C1 493 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 KIAA0232Q92628 1395 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 RNF17Q9BXT8 1623 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 SETDB1Q15047 1291 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 ANO6Q4KMQ2 910 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 CEP85LQ5SZL2 805 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 SH3GL3Q99963 347 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 LMBRD1Q9NUN5 540 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 MPDZO75970 2070 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 WDR81Q562E7 1941 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 SKIDA1Q1XH10 827 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC65Q8IXS2 484 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 PPFIBP2Q8ND30 876 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 TCHPQ9BT92 498 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 IQGAP1P46940 1657 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 RNASELQ05823 741 aaKnown RBP5.11□□□□□ -1.59
CNOT1-201ENST00000317147 USP48Q86UV5 1035 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 SMARCC2Q8TAQ2 1214 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 NBPF3Q9H094 633 aa5.11□□□□□ -1.59
CNOT1-201ENST00000317147 BICDL2A1A5D9 508 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 PPP2R3AQ06190 1150 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC152Q4G0S7 254 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 C1orf141Q5JVX7 400 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 SARM1Q6SZW1 724 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TAOK1Q7L7X3 1001 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TDRD7Q8NHU6 1098 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TRERF1Q96PN7 1200 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 ZBTB40Q9NUA8 1239 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 FAM184BQ9ULE4 1060 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 DYNC1I2Q13409 638 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 NFXL1Q6ZNB6 911 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TMC6Q7Z403 805 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC170Q8IYT3 715 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 NUP58Q9BVL2 599 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 MAP3K5Q99683 1374 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 LOXHD1Q8IVV2 1947 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 AKAP6Q13023 2319 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 RGPD8O14715 1765 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 UBASH3AP57075 661 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CCDC186Q7Z3E2 898 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CTNNBL1Q8WYA6 563 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CABIN1Q9Y6J0 2220 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 NDUFAB1O14561 156 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 EVCP57679 992 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TMTC2Q8N394 836 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 C8orf76Q96K31 380 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 THUMPD2Q9BTF0 503 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 DMRT2Q9Y5R5 561 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 PLB1Q6P1J6 1458 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 NUTM2FA1L443 756 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 GOLGA6BA6NDN3 693 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 CTIFO43310 598 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 ARID4AP29374 1257 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 KIAA1524Q8TCG1 905 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 MAML3Q96JK9 1138 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 RMDN2Q96LZ7 410 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 SEC62Q99442 399 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 NUP88Q99567 741 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 NAPGQ99747 312 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 BPIFA3Q9BQP9 254 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 ZNF287Q9HBT7 754 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 AKAP2Q9Y2D5 859 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 RRP15Q9Y3B9 282 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 MINK1Q8N4C8 1332 aaPredicted RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 SPTBN1Q01082 2364 aaKnown RBP5.1□□□□□ -1.59
CNOT1-201ENST00000317147 TRIM37O94972 964 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 AMPHP49418 695 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 DEUP1Q05D60 604 aa5.1□□□□□ -1.59
CNOT1-201ENST00000317147 LZICQ8WZA0 190 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms