RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.07
PCDHB9-201ENST00000316105 HSPD1P10809 573 aaKnown RBP15.52■□□□□ 0.07
PCDHB9-201ENST00000316105 DHX8Q14562 1220 aaKnown RBP15.52■□□□□ 0.07
PCDHB9-201ENST00000316105 SPATA31A3Q5VYP0 1347 aa15.52■□□□□ 0.07
PCDHB9-201ENST00000316105 KLHL10Q6JEL2 608 aa15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 CCP110O43303 1012 aa15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 CYP21A2P08686 494 aa15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 NOLC1Q14978 699 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 NECTIN1Q15223 517 aa15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 ZBTB38Q8NAP3 1195 aaPredicted RBP15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 ESR2Q92731 530 aa15.51■□□□□ 0.07
PCDHB9-201ENST00000316105 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 NAA16Q6N069 864 aaPredicted RBP15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 TSPY2A6NKD2 308 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 NLRP3Q96P20 1036 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 SETDB2Q96T68 719 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 CCDC102BQ68D86 513 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 BRINP3Q76B58 766 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 PPFIBP1Q86W92 1011 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 ZKSCAN3Q9BRR0 538 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 TRMT1Q9NXH9 659 aaKnown RBP15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 ADORA1P30542 326 aa15.5■□□□□ 0.07
PCDHB9-201ENST00000316105 CTSWP56202 376 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 PTPN14Q15678 1187 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 AOPEPQ8N6M6 819 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 C8orf37Q96NL8 207 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 NSFL1CQ9UNZ2 370 aaKnown RBP15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 A0A1B0GVL5 298 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 TMTC2Q8N394 836 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 NLRP5P59047 1200 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 TMC6Q7Z403 805 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 TTC6Q86TZ1 520 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 LPIN2Q92539 896 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 CDK5RAP3Q96JB5 506 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 ARMT1Q9H993 441 aa15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 ANGEL1Q9UNK9 670 aaKnown RBP15.49■□□□□ 0.07
PCDHB9-201ENST00000316105 MAGEB6P1A0A0J9YX57 407 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 TNNT1P13805 278 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 ZNF532Q9HCE3 1301 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 GNAT2P19087 354 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 BRAPQ7Z569 592 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 ZNF444Q8N0Y2 327 aaPredicted RBP15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 OFD1O75665 1012 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 PARP10Q53GL7 1025 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 PPP1R9BQ96SB3 815 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 GREM2Q9H772 168 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 MAP3K15Q6ZN16 1313 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 LIG1P18858 919 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 CRNKL1Q9BZJ0 848 aaKnown RBP15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 ZDHHC9Q9Y397 364 aa15.48■□□□□ 0.07
PCDHB9-201ENST00000316105 RFC4P35249 363 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 SMARCE1Q969G3 411 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 CLSTN2Q9H4D0 955 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 MAGEC2Q9UBF1 373 aaPredicted RBP15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 PTGS1P23219 599 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 FAM160A1Q05DH4 1040 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 PDE4BQ07343 736 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 GPR108Q9NPR9 543 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 ARGLU1Q9NWB6 273 aaPredicted RBP15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 REREQ9P2R6 1566 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 ATL3Q6DD88 541 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 AK7Q96M32 723 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 ZBTB1Q9Y2K1 713 aa15.47■□□□□ 0.07
PCDHB9-201ENST00000316105 ZMYM1Q5SVZ6 1142 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 H7C1W4 665 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 NEMFO60524 1076 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 ZNF287Q9HBT7 754 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 LMTK3Q96Q04 1460 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 FGAP02671 866 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 STIM1Q13586 685 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 CDCA7Q9BWT1 371 aaPredicted RBP15.46■□□□□ 0.07
PCDHB9-201ENST00000316105 PFKFB2O60825 505 aa15.46■□□□□ 0.06
PCDHB9-201ENST00000316105 CIAO1O76071 339 aa15.46■□□□□ 0.06
PCDHB9-201ENST00000316105 GSDMDP57764 484 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 SPATA5Q8NB90 893 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 JAG2Q9Y219 1238 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 PXDNLA1KZ92 1463 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 MAST3O60307 1309 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 SCRN1Q12765 414 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 TMEM87BQ96K49 555 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 IL25Q9H293 177 aa15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 ZNF335Q9H4Z2 1342 aaPredicted RBP15.45■□□□□ 0.06
PCDHB9-201ENST00000316105 CCDC194A0A1B0GVG4 234 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 C6orf229H3BNL8 230 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 TOM1O60784 492 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 PI16Q6UXB8 463 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
PCDHB9-201ENST00000316105 MROH5Q6ZUA9 1318 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms