RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SNAP23O00161 211 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 CIAO1O76071 339 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 CCDC24Q8N4L8 307 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 SEC62Q99442 399 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 CNNM1Q9NRU3 951 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
SCAMP4-201ENST00000316097 GOLIM4O00461 696 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 GNPATO15228 680 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 OGFRQ9NZT2 677 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 NAA30Q147X3 362 aaPredicted RBP20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 RIPOR2Q9Y4F9 1068 aa20.18■□□□□ 0.82
SCAMP4-201ENST00000316097 GOLGA6L4A6NEF3 574 aa20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 METTL24Q5JXM2 366 aa20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 ZNF589Q86UQ0 364 aaPredicted RBP20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 ZNF75DP51815 510 aa20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 USPL1Q5W0Q7 1092 aa20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 TM6SF1Q9BZW5 370 aa20.17■□□□□ 0.82
SCAMP4-201ENST00000316097 XAGE2Q96GT9 111 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 HAUS7Q99871 368 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 ELP1O95163 1332 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 NTSR2O95665 410 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 PI16Q6UXB8 463 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 CCDC129Q6ZRS4 1044 aa20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 TFIP11Q9UBB9 837 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-201ENST00000316097 THSD7AQ9UPZ6 1657 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.827e-6■■■■□ 25.4
SCAMP4-201ENST00000316097 SYCP1Q15431 976 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 GORABQ5T7V8 394 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 C3orf67Q6ZVT6 689 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 ZNF771Q7L3S4 317 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 PLA2G4DQ86XP0 818 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 BCL11BQ9C0K0 894 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 SCARF1Q14162 830 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 CCDC112Q8NEF3 446 aa20.15■□□□□ 0.82
SCAMP4-201ENST00000316097 KCNJ4P48050 445 aa20.14■□□□□ 0.82
SCAMP4-201ENST00000316097 TPD52L1Q16890 204 aaPredicted RBP20.14■□□□□ 0.82
SCAMP4-201ENST00000316097 ERFEQ4G0M1 354 aa20.14■□□□□ 0.82
SCAMP4-201ENST00000316097 GPR108Q9NPR9 543 aa20.14■□□□□ 0.82
SCAMP4-201ENST00000316097 LRRC4BQ9NT99 713 aa20.14■□□□□ 0.82
SCAMP4-201ENST00000316097 ZNF609O15014 1411 aa20.14■□□□□ 0.81
SCAMP4-201ENST00000316097 ATRNO75882 1429 aa20.14■□□□□ 0.81
SCAMP4-201ENST00000316097 TAF5LO75529 589 aa20.14■□□□□ 0.81
SCAMP4-201ENST00000316097 IFIT1P09914 478 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-201ENST00000316097 SPATA32Q96LK8 384 aa20.14■□□□□ 0.81
SCAMP4-201ENST00000316097 COL9A3Q14050 684 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 CLIP2Q9UDT6 1046 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 RBM8AQ9Y5S9 174 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 CACTINQ8WUQ7 758 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 ZNF592Q92610 1267 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 TCEANC2Q96MN5 208 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 DNAJC25Q9H1X3 360 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 DDX19AQ9NUU7 478 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 PAG1Q9NWQ8 432 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 CGNQ9P2M7 1197 aaKnown RBP20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 CCDC171Q6TFL3 1326 aa20.13■□□□□ 0.81
SCAMP4-201ENST00000316097 ZNF165P49910 485 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 CREB3L3Q68CJ9 461 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 KCNB2Q92953 911 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 SCAND2PQ9GZW5 306 aaPredicted RBP20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 PAXBP1Q9Y5B6 917 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 BTAF1O14981 1849 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 ANKRD36CQ5JPF3 1778 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 PDCP20941 246 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 CLSTN2Q9H4D0 955 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 TAF6LQ9Y6J9 622 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 CNTNAP4Q9C0A0 1308 aa20.12■□□□□ 0.81
SCAMP4-201ENST00000316097 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 TRIM37O94972 964 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 CCDC144BQ3MJ40 725 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 RIC1Q4ADV7 1423 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 NR1I2O75469 434 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 TTC39AQ5SRH9 613 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 BICD2Q8TD16 824 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 LEO1Q8WVC0 666 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 DDX41Q9UJV9 622 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 AKAP2Q9Y2D5 859 aa20.11■□□□□ 0.81
SCAMP4-201ENST00000316097 WTIPA6NIX2 430 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 CCDC158Q5M9N0 1113 aa20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 FAM196AQ6ZSG2 479 aa20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 VGLL2Q8N8G2 317 aa20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 RTCBQ9Y3I0 505 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 RBM43Q6ZSC3 357 aaKnown RBP20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 KBTBD3Q8NAB2 608 aa20.1■□□□□ 0.81
SCAMP4-201ENST00000316097 HIP1O00291 1037 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms