RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CALML3P27482 149 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 DHX37Q8IY37 1157 aaKnown RBP10.38□□□□□ -0.75
CTC1-201ENST00000315684 FERMT2Q96AC1 680 aa10.38□□□□□ -0.75
CTC1-201ENST00000315684 B4DLN1 442 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 ZAP70P43403 619 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 MRPL12P52815 198 aaKnown RBP10.37□□□□□ -0.75
CTC1-201ENST00000315684 SPATA5Q8NB90 893 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 SPATA31A3Q5VYP0 1347 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 ALG1Q9BT22 464 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 GREM2Q9H772 168 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 DACH1Q9UI36 760 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 PALLDQ8WX93 1383 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 MLH3Q9UHC1 1453 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 UBA7P41226 1012 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 GCKRQ14397 625 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 TBC1D10BQ4KMP7 808 aaPredicted RBP10.37□□□□□ -0.75
CTC1-201ENST00000315684 TTC22Q5TAA0 569 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 SPON1Q9HCB6 807 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 PROSER3Q2NL68 480 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 TTLL6Q8N841 843 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 PHACTR2O75167 634 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 TBCAO75347 108 aaKnown RBP10.37□□□□□ -0.75
CTC1-201ENST00000315684 AFMP43652 599 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 TNNI3KQ59H18 835 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 PRR36Q9H6K5 1346 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 FPGT-TNNI3KV9GXZ4 949 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 MAST3O60307 1309 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 MACROD2A1Z1Q3 448 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 CHRNDQ07001 517 aa10.37□□□□□ -0.75
CTC1-201ENST00000315684 ZNF277Q9NRM2 450 aaPredicted RBP10.37□□□□□ -0.75
CTC1-201ENST00000315684 hCG_1642624A0A1W2PR95 340 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 ZBED4O75132 1171 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 MCM7P33993 719 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 CEP85Q6P2H3 762 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 SH2D4AQ9H788 454 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 CNNM2Q9H8M5 875 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
CTC1-201ENST00000315684 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
CTC1-201ENST00000315684 MAP3K4Q9Y6R4 1608 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 PDE1AP54750 535 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 RNF169Q8NCN4 708 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 CNNM3Q8NE01 707 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 C6orf50Q9HD87 102 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 CHRNA5P30532 468 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 EZH2Q15910 746 aaKnown RBP10.36□□□□□ -0.75
CTC1-201ENST00000315684 LPIN2Q92539 896 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 DNAI2Q9GZS0 605 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 GOPCQ9HD26 462 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
CTC1-201ENST00000315684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.36□□□□□ -0.75
CTC1-201ENST00000315684 NEURL1BA8MQ27 555 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
CTC1-201ENST00000315684 ATP2B4P23634 1241 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 TXNRD1Q16881 649 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 CFBP00751 764 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 CCDC178Q5BJE1 867 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 CLTCQ00610 1675 aaKnown RBP10.35□□□□□ -0.75
CTC1-201ENST00000315684 MAP3K15Q6ZN16 1313 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 PRKCSHP14314 528 aaPredicted RBP10.35□□□□□ -0.75
CTC1-201ENST00000315684 GNAT2P19087 354 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 CCDC93Q567U6 631 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
CTC1-201ENST00000315684 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 MAGI2Q86UL8 1455 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 RLBP1P12271 317 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 SLC1A4P43007 532 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 HSP90AA4PQ58FG1 418 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 SDR42E1Q8WUS8 393 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 CPLX3Q8WVH0 158 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 LIMCH1Q9UPQ0 1083 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 AOC3Q16853 763 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 JCADQ9P266 1359 aa10.35□□□□□ -0.75
CTC1-201ENST00000315684 TRAK2O60296 914 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 CACNA2D4Q7Z3S7 1137 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 MYL10Q9BUA6 226 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 TMX1Q9H3N1 280 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
CTC1-201ENST00000315684 HOOK2Q96ED9 719 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 ZNF532Q9HCE3 1301 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 RDXP35241 583 aaKnown RBP10.34□□□□□ -0.75
CTC1-201ENST00000315684 Q3C1V9 767 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 CCDC40Q4G0X9 1142 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 NUP62CLQ9H1M0 184 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 ANKRD62A6NC57 917 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 TNFAIP1Q13829 316 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 BRDTQ58F21 947 aaPredicted RBP10.34□□□□□ -0.75
CTC1-201ENST00000315684 RIMS1Q86UR5 1692 aaKnown RBP10.34□□□□□ -0.75
CTC1-201ENST00000315684 NEFHP12036 1026 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 ADCY10Q96PN6 1610 aa10.34□□□□□ -0.75
CTC1-201ENST00000315684 CPA1P15085 419 aa10.33□□□□□ -0.76
CTC1-201ENST00000315684 BTDP43251 543 aa10.33□□□□□ -0.76
CTC1-201ENST00000315684 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms