RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 FER1L4A9Z1Z3 1794 aa15.64■□□□□ 0.09
SKA3-202ENST00000314759 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
SKA3-202ENST00000314759 MAST3O60307 1309 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 KIF2AO00139 706 aaPredicted RBP15.63■□□□□ 0.09
SKA3-202ENST00000314759 POLR3DP05423 398 aaPredicted RBP15.63■□□□□ 0.09
SKA3-202ENST00000314759 ERCC6LQ2NKX8 1250 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 IFNKQ9P0W0 207 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 SLIT3O75094 1523 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 ABCC6O95255 1503 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 SMC2O95347 1197 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 FOXO4P98177 505 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 PPP1R13BQ96KQ4 1090 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 BPIFA3Q9BQP9 254 aa15.63■□□□□ 0.09
SKA3-202ENST00000314759 CAMTA1Q9Y6Y1 1673 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 PHKG2P15735 406 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 STK38Q15208 465 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 SF3A1Q15459 793 aaKnown RBP15.62■□□□□ 0.09
SKA3-202ENST00000314759 TMC6Q7Z403 805 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 L2HGDHQ9H9P8 463 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 CCDC66A2RUB6 948 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 BIN1O00499 593 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 EVCP57679 992 aa15.62■□□□□ 0.09
SKA3-202ENST00000314759 ZRSR1Q15695 479 aaKnown RBP15.61■□□□□ 0.09
SKA3-202ENST00000314759 KCNG4Q8TDN1 519 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 TIGD1Q96MW7 591 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 FMNL2Q96PY5 1086 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 M0R2C6 588 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 RNF113AO15541 343 aaKnown RBP15.61■□□□□ 0.09
SKA3-202ENST00000314759 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
SKA3-202ENST00000314759 FBXL16Q8N461 479 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 CCDC150Q8NCX0 1101 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 SPTLC2O15270 562 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 NCAPHQ15003 741 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 SYT10Q6XYQ8 523 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 C8orf76Q96K31 380 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 TRERF1Q96PN7 1200 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 GJB4Q9NTQ9 266 aa15.61■□□□□ 0.09
SKA3-202ENST00000314759 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
SKA3-202ENST00000314759 ZNF202O95125 648 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
SKA3-202ENST00000314759 SFPQP23246 707 aaKnown RBP eCLIP15.6■□□□□ 0.09
SKA3-202ENST00000314759 CCDC93Q567U6 631 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 FBXO18Q8NFZ0 1043 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 CHMP4CQ96CF2 233 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 PSDA5PKW4 1024 aaPredicted RBP15.6■□□□□ 0.09
SKA3-202ENST00000314759 YEATS4O95619 227 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 IFIT1P09914 478 aaKnown RBP15.6■□□□□ 0.09
SKA3-202ENST00000314759 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
SKA3-202ENST00000314759 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 OSBP2Q969R2 916 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 GPR108Q9NPR9 543 aa15.6■□□□□ 0.09
SKA3-202ENST00000314759 H7C1W4 665 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 H2AFXP16104 143 aaPredicted RBP15.59■□□□□ 0.09
SKA3-202ENST00000314759 NLRP12P59046 1061 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 MYSM1Q5VVJ2 828 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 TICAM2Q86XR7 235 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 NLRP2Q9NX02 1062 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 FHOD1Q9Y613 1164 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 LRRC24Q50LG9 513 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 NOL10Q9BSC4 688 aaKnown RBP15.59■□□□□ 0.09
SKA3-202ENST00000314759 HPS5Q9UPZ3 1129 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
SKA3-202ENST00000314759 FOXP2O15409 715 aa15.58■□□□□ 0.09
SKA3-202ENST00000314759 CAPN2P17655 700 aa15.58■□□□□ 0.09
SKA3-202ENST00000314759 HAND2P61296 217 aa15.58■□□□□ 0.09
SKA3-202ENST00000314759 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.09
SKA3-202ENST00000314759 KIF28PB7ZC32 967 aa15.58■□□□□ 0.08
SKA3-202ENST00000314759 IL15P40933 162 aaPredicted RBP15.58■□□□□ 0.08
SKA3-202ENST00000314759 KCNJ6P48051 423 aa15.58■□□□□ 0.08
SKA3-202ENST00000314759 CLCN6P51797 869 aa15.58■□□□□ 0.08
SKA3-202ENST00000314759 ZNF594Q96JF6 807 aaPredicted RBP15.58■□□□□ 0.08
SKA3-202ENST00000314759 ORC3Q9UBD5 711 aaPredicted RBP15.58■□□□□ 0.08
SKA3-202ENST00000314759 A0A1B0GUL7 405 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 LMOD1P29536 600 aaPredicted RBP15.57■□□□□ 0.08
SKA3-202ENST00000314759 ISM2Q6H9L7 571 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 RAB11FIP4Q86YS3 637 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 HSD3B7Q9H2F3 369 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 RGPD5Q99666 1765 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 KLF18A0A0U1RQI7 1052 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 ATP1A3P13637 1013 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 PFKFB1P16118 471 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 TATP17735 454 aaPredicted RBP15.57■□□□□ 0.08
SKA3-202ENST00000314759 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 CDK11BP21127 795 aaKnown RBP15.57■□□□□ 0.08
SKA3-202ENST00000314759 CMA1P23946 247 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 FANCCQ00597 558 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 BMS1Q14692 1282 aaKnown RBP15.57■□□□□ 0.08
SKA3-202ENST00000314759 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
SKA3-202ENST00000314759 GOLGA8BA8MQT2 603 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 EYA2O00167 538 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 PRC1O43663 620 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 WDHD1O75717 1129 aaPredicted RBP15.56■□□□□ 0.08
SKA3-202ENST00000314759 CYP2C19P33261 490 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 PLA2G4AP47712 749 aa15.56■□□□□ 0.08
SKA3-202ENST00000314759 HNRNPH2P55795 449 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 359.8 ms