RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ZGPATQ8N5A5 531 aaKnown RBP19.95■□□□□ 0.78
CLCF1-201ENST00000312438 ZSCAN31Q96LW9 406 aaPredicted RBP19.95■□□□□ 0.78
CLCF1-201ENST00000312438 WWC3Q9ULE0 1092 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 DENND2AQ9ULE3 1009 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 TAF6LQ9Y6J9 622 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 ARAP2Q8WZ64 1704 aa19.94■□□□□ 0.78
CLCF1-201ENST00000312438 TCRBV5S4A2TA0A5A2 114 aa19.94■□□□□ 0.78
CLCF1-201ENST00000312438 RPS6KB1P23443 525 aa19.94■□□□□ 0.78
CLCF1-201ENST00000312438 ANKRD1Q15327 319 aa19.94■□□□□ 0.78
CLCF1-201ENST00000312438 LEMD3Q9Y2U8 911 aa19.94■□□□□ 0.78
CLCF1-201ENST00000312438 BBOX1O75936 387 aa19.93■□□□□ 0.78
CLCF1-201ENST00000312438 HMGB1P09429 215 aaKnown RBP19.93■□□□□ 0.78
CLCF1-201ENST00000312438 HOXA10P31260 410 aaPredicted RBP19.93■□□□□ 0.78
CLCF1-201ENST00000312438 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
CLCF1-201ENST00000312438 AKAP11Q9UKA4 1901 aa19.93■□□□□ 0.78
CLCF1-201ENST00000312438 ZBTB22O15209 634 aa19.92■□□□□ 0.78
CLCF1-201ENST00000312438 HIBADHP31937 336 aaKnown RBP19.92■□□□□ 0.78
CLCF1-201ENST00000312438 MAGEB6Q8N7X4 407 aa19.92■□□□□ 0.78
CLCF1-201ENST00000312438 ANKIB1Q9P2G1 1089 aa19.92■□□□□ 0.78
CLCF1-201ENST00000312438 FGAP02671 866 aa19.92■□□□□ 0.78
CLCF1-201ENST00000312438 CRAMP1Q96RY5 1269 aa19.92■□□□□ 0.78
CLCF1-201ENST00000312438 BRIP1Q9BX63 1249 aa19.92■□□□□ 0.78
CLCF1-201ENST00000312438 SH2B1Q9NRF2 756 aaPredicted RBP19.92■□□□□ 0.78
CLCF1-201ENST00000312438 IQSEC3Q9UPP2 1182 aaPredicted RBP19.92■□□□□ 0.78
CLCF1-201ENST00000312438 IMMTQ16891 758 aaKnown RBP19.91■□□□□ 0.78
CLCF1-201ENST00000312438 AIDAQ96BJ3 306 aa19.91■□□□□ 0.78
CLCF1-201ENST00000312438 EP400Q96L91 3159 aa19.91■□□□□ 0.78
CLCF1-201ENST00000312438 PNPLA7Q6ZV29 1317 aa19.91■□□□□ 0.78
CLCF1-201ENST00000312438 FOXP2O15409 715 aa19.9■□□□□ 0.78
CLCF1-201ENST00000312438 TNPO1Q92973 898 aaKnown RBP19.9■□□□□ 0.78
CLCF1-201ENST00000312438 CAMKK2Q96RR4 588 aa19.9■□□□□ 0.78
CLCF1-201ENST00000312438 STRBPQ96SI9 672 aaKnown RBP19.9■□□□□ 0.78
CLCF1-201ENST00000312438 XDHP47989 1333 aa19.9■□□□□ 0.78
CLCF1-201ENST00000312438 PDS5AQ29RF7 1337 aaKnown RBP19.9■□□□□ 0.78
CLCF1-201ENST00000312438 LARP6Q9BRS8 491 aaKnown RBP19.9■□□□□ 0.78
CLCF1-201ENST00000312438 TNRC6CQ9HCJ0 1690 aaKnown RBP19.89■□□□□ 0.78
CLCF1-201ENST00000312438 KLRK1P26718 216 aa19.89■□□□□ 0.77
CLCF1-201ENST00000312438 TTLL5Q6EMB2 1281 aa19.89■□□□□ 0.77
CLCF1-201ENST00000312438 ABCF2Q9UG63 623 aa19.89■□□□□ 0.77
CLCF1-201ENST00000312438 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.89■□□□□ 0.77
CLCF1-201ENST00000312438 PARP3Q9Y6F1 533 aa19.89■□□□□ 0.77
CLCF1-201ENST00000312438 E7EWF7 191 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 EN1Q05925 392 aaPredicted RBP19.88■□□□□ 0.77
CLCF1-201ENST00000312438 EZH2Q15910 746 aaKnown RBP19.88■□□□□ 0.77
CLCF1-201ENST00000312438 STOX1Q6ZVD7 989 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 DHX32Q7L7V1 743 aaKnown RBP19.88■□□□□ 0.77
CLCF1-201ENST00000312438 TMC4Q7Z404 712 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 IRS2Q9Y4H2 1338 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 PATL2C9JE40 543 aaKnown RBP19.88■□□□□ 0.77
CLCF1-201ENST00000312438 MMP10P09238 476 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 MCM4P33991 863 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 COL9A3Q14050 684 aaPredicted RBP19.88■□□□□ 0.77
CLCF1-201ENST00000312438 C15orf52Q6ZUT6 534 aaKnown RBP19.88■□□□□ 0.77
CLCF1-201ENST00000312438 RAI14Q9P0K7 980 aa19.88■□□□□ 0.77
CLCF1-201ENST00000312438 TAF1P21675 1872 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 ZNF213O14771 459 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 APPP05067 770 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 ATP2B4P23634 1241 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 ALX1Q15699 326 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 SLC15A2Q16348 729 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 GBP4Q96PP9 640 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 TPCN1Q9ULQ1 816 aa19.87■□□□□ 0.77
CLCF1-201ENST00000312438 GNAT2P19087 354 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 PDE6BP35913 854 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 TOB2Q14106 344 aaPredicted RBP19.86■□□□□ 0.77
CLCF1-201ENST00000312438 ME3Q16798 604 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 TXNRD3Q86VQ6 643 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 TCEANC2Q96MN5 208 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 STK32BQ9NY57 414 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 NSFL1CQ9UNZ2 370 aaKnown RBP19.86■□□□□ 0.77
CLCF1-201ENST00000312438 A0A0G2JLW4 131 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 MBD4O95243 580 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 CYP7A1P22680 504 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 GPSM2P81274 684 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 EXOSC10Q01780 885 aaKnown RBP19.86■□□□□ 0.77
CLCF1-201ENST00000312438 CLEC17AQ6ZS10 378 aa19.86■□□□□ 0.77
CLCF1-201ENST00000312438 IGSF3O75054 1194 aa19.85■□□□□ 0.77
CLCF1-201ENST00000312438 TMED8Q6PL24 325 aaPredicted RBP19.85■□□□□ 0.77
CLCF1-201ENST00000312438 Q6ZUG5 572 aa19.85■□□□□ 0.77
CLCF1-201ENST00000312438 PODXL2Q9NZ53 605 aa19.85■□□□□ 0.77
CLCF1-201ENST00000312438 LARGE1O95461 756 aa19.84■□□□□ 0.77
CLCF1-201ENST00000312438 SRGNP10124 158 aa19.84■□□□□ 0.77
CLCF1-201ENST00000312438 NPR1P16066 1061 aa19.84■□□□□ 0.77
CLCF1-201ENST00000312438 SF3B2Q13435 895 aaKnown RBP19.84■□□□□ 0.77
CLCF1-201ENST00000312438 SP8Q8IXZ3 490 aa19.84■□□□□ 0.77
CLCF1-201ENST00000312438 GGA1Q9UJY5 639 aa19.84■□□□□ 0.77
CLCF1-201ENST00000312438 CASZ1Q86V15 1759 aa19.84■□□□□ 0.77
CLCF1-201ENST00000312438 ALDH1B1P30837 517 aa19.83■□□□□ 0.77
CLCF1-201ENST00000312438 HAND2P61296 217 aa19.83■□□□□ 0.77
CLCF1-201ENST00000312438 ZNF804AQ7Z570 1209 aa19.83■□□□□ 0.77
CLCF1-201ENST00000312438 ARMT1Q9H993 441 aa19.83■□□□□ 0.77
CLCF1-201ENST00000312438 COL1A1P02452 1464 aaPredicted RBP19.83■□□□□ 0.77
CLCF1-201ENST00000312438 TNS1Q9HBL0 1735 aaKnown RBP19.83■□□□□ 0.76
CLCF1-201ENST00000312438 FGD1P98174 961 aa19.83■□□□□ 0.76
CLCF1-201ENST00000312438 PKP1Q13835 747 aa19.83■□□□□ 0.76
CLCF1-201ENST00000312438 CCDC83Q8IWF9 413 aa19.83■□□□□ 0.76
CLCF1-201ENST00000312438 IFNL3Q8IZI9 196 aa19.83■□□□□ 0.76
CLCF1-201ENST00000312438 TDRD7Q8NHU6 1098 aaKnown RBP19.83■□□□□ 0.76
CLCF1-201ENST00000312438 NACAP1Q9BZK3 213 aa19.83■□□□□ 0.76
CLCF1-201ENST00000312438 SMC3Q9UQE7 1217 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms