RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 TNS1Q9HBL0 1735 aaKnown RBP28.13■■■□□ 2.09
SNCB-201ENST00000310112 TAF1P21675 1872 aa28.12■■■□□ 2.09
SNCB-201ENST00000310112 DDX11L8A8MPP1 907 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 SNAP23O00161 211 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 GPAA1O43292 621 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 MCM4P33991 863 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 FBXO33Q7Z6M2 555 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 RPGRQ92834 1020 aaKnown RBP28.11■■■□□ 2.09
SNCB-201ENST00000310112 TNPO1Q92973 898 aaKnown RBP28.11■■■□□ 2.09
SNCB-201ENST00000310112 LEMD3Q9Y2U8 911 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 ZNF532Q9HCE3 1301 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 TCRBV5S4A2TA0A5A2 114 aa28.11■■■□□ 2.09
SNCB-201ENST00000310112 ZGPATQ8N5A5 531 aaKnown RBP28.11■■■□□ 2.09
SNCB-201ENST00000310112 RBM17Q96I25 401 aaKnown RBP28.11■■■□□ 2.09
SNCB-201ENST00000310112 PUS7LQ9H0K6 701 aaKnown RBP28.11■■■□□ 2.09
SNCB-201ENST00000310112 POLRMTO00411 1230 aaKnown RBP28.1■■■□□ 2.09
SNCB-201ENST00000310112 IMMTQ16891 758 aaKnown RBP28.1■■■□□ 2.09
SNCB-201ENST00000310112 SLFNL1Q499Z3 407 aa28.1■■■□□ 2.09
SNCB-201ENST00000310112 VPS37DQ86XT2 251 aa28.1■■■□□ 2.09
SNCB-201ENST00000310112 ZMYM6O95789 1325 aa28.09■■■□□ 2.09
SNCB-201ENST00000310112 KLRG2A4D1S0 409 aaPredicted RBP28.09■■■□□ 2.09
SNCB-201ENST00000310112 PDIA4P13667 645 aaKnown RBP28.09■■■□□ 2.09
SNCB-201ENST00000310112 TMC4Q7Z404 712 aa28.09■■■□□ 2.09
SNCB-201ENST00000310112 FAM84BQ96KN1 310 aaPredicted RBP28.09■■■□□ 2.09
SNCB-201ENST00000310112 HOXA10P31260 410 aaPredicted RBP28.08■■■□□ 2.09
SNCB-201ENST00000310112 ALX1Q15699 326 aa28.08■■■□□ 2.09
SNCB-201ENST00000310112 NOL8Q76FK4 1167 aaKnown RBP28.08■■■□□ 2.09
SNCB-201ENST00000310112 FBXO41Q8TF61 875 aa28.08■■■□□ 2.09
SNCB-201ENST00000310112 CPA1P15085 419 aa28.07■■■□□ 2.08
SNCB-201ENST00000310112 GNAT2P19087 354 aa28.07■■■□□ 2.08
SNCB-201ENST00000310112 ZNF827Q17R98 1081 aa28.07■■■□□ 2.08
SNCB-201ENST00000310112 C15orf52Q6ZUT6 534 aaKnown RBP28.07■■■□□ 2.08
SNCB-201ENST00000310112 CCDC24Q8N4L8 307 aa28.07■■■□□ 2.08
SNCB-201ENST00000310112 CRAMP1Q96RY5 1269 aa28.07■■■□□ 2.08
SNCB-201ENST00000310112 WWC3Q9ULE0 1092 aa28.07■■■□□ 2.08
SNCB-201ENST00000310112 BBOX1O75936 387 aa28.06■■■□□ 2.08
SNCB-201ENST00000310112 GYG1P46976 350 aa28.06■■■□□ 2.08
SNCB-201ENST00000310112 DDR1Q08345 913 aa28.06■■■□□ 2.08
SNCB-201ENST00000310112 DHX32Q7L7V1 743 aaKnown RBP28.06■■■□□ 2.08
SNCB-201ENST00000310112 AIDAQ96BJ3 306 aa28.06■■■□□ 2.08
SNCB-201ENST00000310112 RGS17Q9UGC6 210 aaPredicted RBP28.06■■■□□ 2.08
SNCB-201ENST00000310112 XDHP47989 1333 aa28.05■■■□□ 2.08
SNCB-201ENST00000310112 MYO5AQ9Y4I1 1855 aaKnown RBP28.05■■■□□ 2.08
SNCB-201ENST00000310112 NRXN2Q9P2S2 1712 aa28.05■■■□□ 2.08
SNCB-201ENST00000310112 HIBADHP31937 336 aaKnown RBP28.05■■■□□ 2.08
SNCB-201ENST00000310112 LRP2BPQ9P2M1 347 aa28.05■■■□□ 2.08
SNCB-201ENST00000310112 PNPLA7Q6ZV29 1317 aa28.04■■■□□ 2.08
SNCB-201ENST00000310112 E7EWF7 191 aa28.04■■■□□ 2.08
SNCB-201ENST00000310112 FGAP02671 866 aa28.04■■■□□ 2.08
SNCB-201ENST00000310112 COL23A1Q86Y22 540 aaPredicted RBP28.04■■■□□ 2.08
SNCB-201ENST00000310112 MAGEB6Q8N7X4 407 aa28.04■■■□□ 2.08
SNCB-201ENST00000310112 CHMP4CQ96CF2 233 aa28.04■■■□□ 2.08
SNCB-201ENST00000310112 TAF6LQ9Y6J9 622 aa28.04■■■□□ 2.08
SNCB-201ENST00000310112 GOLGA6L22H0YM25 854 aa28.03■■■□□ 2.08
SNCB-201ENST00000310112 FOXP2O15409 715 aa28.03■■■□□ 2.08
SNCB-201ENST00000310112 FBXL16Q8N461 479 aa28.03■■■□□ 2.08
SNCB-201ENST00000310112 STRBPQ96SI9 672 aaKnown RBP28.03■■■□□ 2.08
SNCB-201ENST00000310112 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
SNCB-201ENST00000310112 BRIP1Q9BX63 1249 aa28.02■■■□□ 2.08
SNCB-201ENST00000310112 PATL2C9JE40 543 aaKnown RBP28.01■■■□□ 2.07
SNCB-201ENST00000310112 ZNF213O14771 459 aa28.01■■■□□ 2.07
SNCB-201ENST00000310112 ATP2B4P23634 1241 aa28.01■■■□□ 2.07
SNCB-201ENST00000310112 TOB2Q14106 344 aaPredicted RBP28.01■■■□□ 2.07
SNCB-201ENST00000310112 SMC3Q9UQE7 1217 aa28.01■■■□□ 2.07
SNCB-201ENST00000310112 WDR19Q8NEZ3 1342 aa28.01■■■□□ 2.07
SNCB-201ENST00000310112 IRS2Q9Y4H2 1338 aa28.01■■■□□ 2.07
SNCB-201ENST00000310112 EXOSC10Q01780 885 aaKnown RBP28■■■□□ 2.07
SNCB-201ENST00000310112 STOX1Q6ZVD7 989 aa28■■■□□ 2.07
SNCB-201ENST00000310112 AGXT2Q9BYV1 514 aa28■■■□□ 2.07
SNCB-201ENST00000310112 TPCN1Q9ULQ1 816 aa28■■■□□ 2.07
SNCB-201ENST00000310112 LAMA4Q16363 1823 aa28■■■□□ 2.07
SNCB-201ENST00000310112 BRD1O95696 1058 aa27.99■■■□□ 2.07
SNCB-201ENST00000310112 ME3Q16798 604 aa27.99■■■□□ 2.07
SNCB-201ENST00000310112 ANKIB1Q9P2G1 1089 aa27.99■■■□□ 2.07
SNCB-201ENST00000310112 MYH13Q9UKX3 1938 aa27.99■■■□□ 2.07
SNCB-201ENST00000310112 WDR33Q9C0J8 1336 aaKnown RBP27.98■■■□□ 2.07
SNCB-201ENST00000310112 SPTY2D1Q68D10 685 aaPredicted RBP27.98■■■□□ 2.07
SNCB-201ENST00000310112 Q6ZUG5 572 aa27.98■■■□□ 2.07
SNCB-201ENST00000310112 NACAP1Q9BZK3 213 aa27.98■■■□□ 2.07
SNCB-201ENST00000310112 PODXL2Q9NZ53 605 aa27.98■■■□□ 2.07
SNCB-201ENST00000310112 COL1A1P02452 1464 aaPredicted RBP27.97■■■□□ 2.07
SNCB-201ENST00000310112 MBD4O95243 580 aa27.97■■■□□ 2.07
SNCB-201ENST00000310112 TTLL5Q6EMB2 1281 aa27.97■■■□□ 2.07
SNCB-201ENST00000310112 ZNF804AQ7Z570 1209 aa27.97■■■□□ 2.07
SNCB-201ENST00000310112 NCOA7Q8NI08 942 aa27.97■■■□□ 2.07
SNCB-201ENST00000310112 RAI14Q9P0K7 980 aa27.97■■■□□ 2.07
SNCB-201ENST00000310112 PARP3Q9Y6F1 533 aa27.97■■■□□ 2.07
SNCB-201ENST00000310112 QSER1Q2KHR3 1735 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 BAG4O95429 457 aaKnown RBP27.96■■■□□ 2.07
SNCB-201ENST00000310112 LARGE1O95461 756 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 CYP7A1P22680 504 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 PDE6BP35913 854 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 FGD1P98174 961 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 SKOR2Q2VWA4 1001 aaPredicted RBP27.96■■■□□ 2.07
SNCB-201ENST00000310112 CCDC83Q8IWF9 413 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 ABCF2Q9UG63 623 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 SALL1Q9NSC2 1324 aa27.96■■■□□ 2.07
SNCB-201ENST00000310112 DUOX1Q9NRD9 1551 aa27.95■■■□□ 2.07
SNCB-201ENST00000310112 APPP05067 770 aa27.95■■■□□ 2.06
SNCB-201ENST00000310112 TRDNQ13061 729 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms