RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 VPS16Q9H269 839 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 MAPK8IP1Q9UQF2 711 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 MICU3Q86XE3 530 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 EDC3Q96F86 508 aaKnown RBP12.33□□□□□ -0.44
GGA2-201ENST00000309859 MYO1BO43795 1136 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 CDC25BP30305 580 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 NAIF1Q69YI7 327 aaPredicted RBP12.33□□□□□ -0.44
GGA2-201ENST00000309859 SLC35F6Q8N357 371 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 SELENOSQ9BQE4 189 aa12.33□□□□□ -0.44
GGA2-201ENST00000309859 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 PPFIA4O75335 1185 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 MYO1FO00160 1098 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 SRGAP1Q7Z6B7 1085 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 ENO4A6NNW6 628 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 YY1AP1Q9H869 796 aa12.32□□□□□ -0.44
GGA2-201ENST00000309859 SPATS2LQ9NUQ6 558 aaKnown RBP12.32□□□□□ -0.44
GGA2-201ENST00000309859 CLTAP09496 248 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 PHLPP2Q6ZVD8 1323 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
GGA2-201ENST00000309859 SASH3O75995 380 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 NLRP12P59046 1061 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
GGA2-201ENST00000309859 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 STK38LQ9Y2H1 464 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 IDEP14735 1019 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 CFAP58Q5T655 872 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
GGA2-201ENST00000309859 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 TADA3O75528 432 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 ABCC4O15439 1325 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 PDCLQ13371 301 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 SNCBQ16143 134 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 IQCA1Q86XH1 822 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
GGA2-201ENST00000309859 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 MARCH6O60337 910 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
GGA2-201ENST00000309859 ERCC3P19447 782 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 USHBP1Q8N6Y0 703 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 CCDC151A5D8V7 595 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 TULP2O00295 520 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 NOP2P46087 812 aaKnown RBP12.3□□□□□ -0.44
GGA2-201ENST00000309859 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 TDRD12Q587J7 1177 aaKnown RBP12.3□□□□□ -0.44
GGA2-201ENST00000309859 HSP90AB2PQ58FF8 381 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 YIPF3Q9GZM5 350 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 TMEM87AQ8NBN3 555 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 G3BP2Q9UN86 482 aaKnown RBP12.3□□□□□ -0.44
GGA2-201ENST00000309859 HNRNPH1P31943 449 aaKnown RBP12.3□□□□□ -0.44
GGA2-201ENST00000309859 STAMQ92783 540 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 AIDAQ96BJ3 306 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 SLC20A2Q08357 652 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 GOLPH3LQ9H4A5 285 aa12.3□□□□□ -0.44
GGA2-201ENST00000309859 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
GGA2-201ENST00000309859 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 ERICH2A1L162 156 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 H2AFXP16104 143 aaPredicted RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 CKAP4Q07065 602 aaKnown RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 TEX11Q8IYF3 940 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 ERCC6Q03468 1493 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 CEP89Q96ST8 783 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 CLIC4Q9Y696 253 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 TRIM21P19474 475 aaKnown RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 EPS15P42566 896 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 PTPROQ16827 1216 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.29□□□□□ -0.44
GGA2-201ENST00000309859 PHAXQ9H814 394 aaKnown RBP12.29□□□□□ -0.44
GGA2-201ENST00000309859 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
GGA2-201ENST00000309859 GGCXP38435 758 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 RRAGBQ5VZM2 374 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms