RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 RBM28Q9NW13 759 aaKnown RBP12.14□□□□□ -0.47
ZNF556-201ENST00000307635 DKC1O60832 514 aaKnown RBP eCLIP12.14□□□□□ -0.47
ZNF556-201ENST00000307635 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
ZNF556-201ENST00000307635 CEP152O94986 1710 aa12.14□□□□□ -0.47
ZNF556-201ENST00000307635 TCP10Q12799 353 aa12.14□□□□□ -0.47
ZNF556-201ENST00000307635 DHX8Q14562 1220 aaKnown RBP12.13□□□□□ -0.47
ZNF556-201ENST00000307635 MEIS3Q99687 375 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 DEF6Q9H4E7 631 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 ZBTB43O43298 467 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
ZNF556-201ENST00000307635 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 TCP10L2B9ZVM9 353 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
ZNF556-201ENST00000307635 SBNO2Q9Y2G9 1366 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 MICU3Q86XE3 530 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 CCAR2Q8N163 923 aaKnown RBP12.13□□□□□ -0.47
ZNF556-201ENST00000307635 MBD3O95983 291 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
ZNF556-201ENST00000307635 CNGA1P29973 690 aa12.13□□□□□ -0.47
ZNF556-201ENST00000307635 BACH1O14867 736 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
ZNF556-201ENST00000307635 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 BMP15O95972 392 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 CALML3P27482 149 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 C1orf167Q5SNV9 1468 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 A0A1B0GUL7 405 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 CETN2P41208 172 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 CCDC144CPQ8IYA2 1237 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 XAGE2Q96GT9 111 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 PA2G4Q9UQ80 394 aaKnown RBP12.12□□□□□ -0.47
ZNF556-201ENST00000307635 SPHKAPQ2M3C7 1700 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 TAF5LO75529 589 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
ZNF556-201ENST00000307635 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 MBD4O95243 580 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 HOXD10P28358 340 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 GNA11P29992 359 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 FIBPO43427 364 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 RAD50Q92878 1312 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
ZNF556-201ENST00000307635 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
ZNF556-201ENST00000307635 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 USP14P54578 494 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
ZNF556-201ENST00000307635 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
ZNF556-201ENST00000307635 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 SPOUT1Q5T280 376 aaKnown RBP12.1□□□□□ -0.47
ZNF556-201ENST00000307635 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 ZNF804BA4D1E1 1349 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 LRSAM1Q6UWE0 723 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZNF556-201ENST00000307635 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 KIAA0825Q8IV33 1275 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 AZI2Q9H6S1 392 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
ZNF556-201ENST00000307635 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 KDRP35968 1356 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 VAMP4O75379 141 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 GIGYF1O75420 1035 aaPredicted RBP12.09□□□□□ -0.47
ZNF556-201ENST00000307635 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 ZNF397Q8NF99 534 aaPredicted RBP12.09□□□□□ -0.47
ZNF556-201ENST00000307635 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 CHL1O00533 1208 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 SEMA3EO15041 775 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 LAMC1P11047 1609 aa12.09□□□□□ -0.47
ZNF556-201ENST00000307635 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
ZNF556-201ENST00000307635 SERPINC1P01008 464 aa12.08□□□□□ -0.47
ZNF556-201ENST00000307635 CDR1P51861 262 aa12.08□□□□□ -0.47
ZNF556-201ENST00000307635 PIGBQ92521 554 aa12.08□□□□□ -0.47
ZNF556-201ENST00000307635 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.47
ZNF556-201ENST00000307635 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.48
ZNF556-201ENST00000307635 TNMDQ9H2S6 317 aa12.08□□□□□ -0.48
ZNF556-201ENST00000307635 CCP110O43303 1012 aa12.08□□□□□ -0.48
ZNF556-201ENST00000307635 TNNI3KQ59H18 835 aa12.08□□□□□ -0.48
ZNF556-201ENST00000307635 CCDC117Q8IWD4 279 aaPredicted RBP12.08□□□□□ -0.48
ZNF556-201ENST00000307635 CAGE1Q8TC20 777 aa12.08□□□□□ -0.48
ZNF556-201ENST00000307635 FPGT-TNNI3KV9GXZ4 949 aa12.08□□□□□ -0.48
ZNF556-201ENST00000307635 DIP2AQ14689 1571 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 458.3 ms