RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
SCG2-201ENST00000305409 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 ZPR1O75312 459 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 ZFYP08048 801 aaPredicted RBP13.5□□□□□ -0.25
SCG2-201ENST00000305409 CERKQ8TCT0 537 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.5□□□□□ -0.25
SCG2-201ENST00000305409 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
SCG2-201ENST00000305409 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 NBPF5PQ86XG9 351 aaPredicted RBP13.5□□□□□ -0.25
SCG2-201ENST00000305409 AK7Q96M32 723 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 MYH3P11055 1940 aa13.5□□□□□ -0.25
SCG2-201ENST00000305409 NPHP1O15259 732 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
SCG2-201ENST00000305409 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
SCG2-201ENST00000305409 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 SYCE3A1L190 88 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
SCG2-201ENST00000305409 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 LRRC4BQ9NT99 713 aa13.49□□□□□ -0.25
SCG2-201ENST00000305409 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 KLRK1P26718 216 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
SCG2-201ENST00000305409 FAM196AQ6ZSG2 479 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 ARMT1Q9H993 441 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 ABCF2Q9UG63 623 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 NARFQ9UHQ1 456 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 TCHHQ07283 1943 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 TAF1P21675 1872 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 PRKAB2O43741 272 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 MRE11P49959 708 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
SCG2-201ENST00000305409 ALDH8A1Q9H2A2 487 aaPredicted RBP13.48□□□□□ -0.25
SCG2-201ENST00000305409 JAG2Q9Y219 1238 aa13.48□□□□□ -0.25
SCG2-201ENST00000305409 TCRBV5S4A2TA0A5A2 114 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 ZNF213O14771 459 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 TTF1Q15361 905 aaPredicted RBP13.47□□□□□ -0.25
SCG2-201ENST00000305409 AIDAQ96BJ3 306 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
SCG2-201ENST00000305409 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
SCG2-201ENST00000305409 MBD4O95243 580 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 MINPP1Q9UNW1 487 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 AKAP11Q9UKA4 1901 aa13.47□□□□□ -0.25
SCG2-201ENST00000305409 MYO5AQ9Y4I1 1855 aaKnown RBP13.46□□□□□ -0.25
SCG2-201ENST00000305409 KDM4AO75164 1064 aa13.46□□□□□ -0.25
SCG2-201ENST00000305409 CTDNEP1O95476 244 aa13.46□□□□□ -0.25
SCG2-201ENST00000305409 GUCY1B3Q02153 619 aa13.46□□□□□ -0.25
SCG2-201ENST00000305409 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.25
SCG2-201ENST00000305409 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
SCG2-201ENST00000305409 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.25
SCG2-201ENST00000305409 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.25
SCG2-201ENST00000305409 PRC1O43663 620 aa13.46□□□□□ -0.26
SCG2-201ENST00000305409 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.26
SCG2-201ENST00000305409 RFC4P35249 363 aa13.46□□□□□ -0.26
SCG2-201ENST00000305409 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.26
SCG2-201ENST00000305409 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.26
SCG2-201ENST00000305409 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
SCG2-201ENST00000305409 ANTXR2P58335 489 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
SCG2-201ENST00000305409 STRBPQ96SI9 672 aaKnown RBP13.45□□□□□ -0.26
SCG2-201ENST00000305409 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 RXRAP19793 462 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 CTDSPL2Q05D32 466 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 RC3H1Q5TC82 1133 aaKnown RBP13.45□□□□□ -0.26
SCG2-201ENST00000305409 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
SCG2-201ENST00000305409 PFKFB2O60825 505 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 RALYLQ86SE5 291 aaKnown RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 ADGRA1Q86SQ6 560 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 FAM184AQ8NB25 1140 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 RBSNQ9H1K0 784 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 SENP2Q9HC62 589 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 EPB41L4AQ9HCS5 686 aaPredicted RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 B4E1Z4 1266 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 TRIM37O94972 964 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 CEBPZQ03701 1054 aaKnown RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 MB21D2Q8IYB1 491 aaPredicted RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 BSDC1Q9NW68 430 aaPredicted RBP13.44□□□□□ -0.26
SCG2-201ENST00000305409 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
SCG2-201ENST00000305409 H3BQV1 296 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 RPS8P62241 208 aaKnown RBP13.43□□□□□ -0.26
SCG2-201ENST00000305409 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 TPTE2Q6XPS3 522 aa13.43□□□□□ -0.26
SCG2-201ENST00000305409 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
SCG2-201ENST00000305409 CYB5R4Q7L1T6 521 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms