RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ZNF646O15015 1829 aaPredicted RBP33.12■■■□□ 2.89
HDAC3-201ENST00000305264 ERC2O15083 957 aa33.12■■■□□ 2.89
HDAC3-201ENST00000305264 FRAT2O75474 233 aaPredicted RBP33.12■■■□□ 2.89
HDAC3-201ENST00000305264 GLRX3O76003 335 aaKnown RBP33.12■■■□□ 2.89
HDAC3-201ENST00000305264 NIM1KQ8IY84 436 aa33.12■■■□□ 2.89
HDAC3-201ENST00000305264 JAG2Q9Y219 1238 aa33.12■■■□□ 2.89
HDAC3-201ENST00000305264 YDJCA8MPS7 323 aa33.11■■■□□ 2.89
HDAC3-201ENST00000305264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.11■■■□□ 2.89
HDAC3-201ENST00000305264 PODNQ7Z5L7 613 aa33.1■■■□□ 2.89
HDAC3-201ENST00000305264 KCNQ5Q9NR82 932 aa33.1■■■□□ 2.89
HDAC3-201ENST00000305264 TIAM2Q8IVF5 1701 aa33.1■■■□□ 2.89
HDAC3-201ENST00000305264 PSME4Q14997 1843 aa33.1■■■□□ 2.89
HDAC3-201ENST00000305264 SPATA5Q8NB90 893 aa33.1■■■□□ 2.89
HDAC3-201ENST00000305264 SEMA3EO15041 775 aa33.09■■■□□ 2.89
HDAC3-201ENST00000305264 JDP2Q8WYK2 163 aa33.09■■■□□ 2.89
HDAC3-201ENST00000305264 DNAJC2Q99543 621 aaKnown RBP33.09■■■□□ 2.89
HDAC3-201ENST00000305264 DENND2AQ9ULE3 1009 aa33.09■■■□□ 2.89
HDAC3-201ENST00000305264 CHAF1AQ13111 956 aaPredicted RBP33.09■■■□□ 2.89
HDAC3-201ENST00000305264 HAUS7Q99871 368 aa33.09■■■□□ 2.89
HDAC3-201ENST00000305264 ZAP70P43403 619 aa33.08■■■□□ 2.89
HDAC3-201ENST00000305264 ZBTB22O15209 634 aa33.07■■■□□ 2.88
HDAC3-201ENST00000305264 MAP4K4O95819 1239 aaPredicted RBP33.07■■■□□ 2.88
HDAC3-201ENST00000305264 TTC22Q5TAA0 569 aa33.07■■■□□ 2.88
HDAC3-201ENST00000305264 EDC3Q96F86 508 aaKnown RBP33.07■■■□□ 2.88
HDAC3-201ENST00000305264 ZNRF3Q9ULT6 936 aa33.07■■■□□ 2.88
HDAC3-201ENST00000305264 GSPT1P15170 499 aaKnown RBP33.07■■■□□ 2.88
HDAC3-201ENST00000305264 RNF181Q9P0P0 153 aa33.06■■■□□ 2.88
HDAC3-201ENST00000305264 MYO5AQ9Y4I1 1855 aaKnown RBP33.06■■■□□ 2.88
HDAC3-201ENST00000305264 PDS5AQ29RF7 1337 aaKnown RBP33.05■■■□□ 2.88
HDAC3-201ENST00000305264 GTF2IP78347 998 aa33.05■■■□□ 2.88
HDAC3-201ENST00000305264 FBXW7Q969H0 707 aa33.05■■■□□ 2.88
HDAC3-201ENST00000305264 CYP2E1P05181 493 aaPredicted RBP33.04■■■□□ 2.88
HDAC3-201ENST00000305264 C9orf131Q5VYM1 1079 aa33.04■■■□□ 2.88
HDAC3-201ENST00000305264 ANTXR1Q9H6X2 564 aa33.04■■■□□ 2.88
HDAC3-201ENST00000305264 FAM205AQ6ZU69 1335 aa33.04■■■□□ 2.88
HDAC3-201ENST00000305264 GOLIM4O00461 696 aa33.03■■■□□ 2.88
HDAC3-201ENST00000305264 PAG1Q9NWQ8 432 aa33.03■■■□□ 2.88
HDAC3-201ENST00000305264 AK9Q5TCS8 1911 aa33.02■■■□□ 2.88
HDAC3-201ENST00000305264 RAD17O75943 681 aa33.02■■■□□ 2.88
HDAC3-201ENST00000305264 TTLL5Q6EMB2 1281 aa33.02■■■□□ 2.88
HDAC3-201ENST00000305264 DOCK2Q92608 1830 aa33.02■■■□□ 2.88
HDAC3-201ENST00000305264 TBC1D9Q6ZT07 1266 aa33.01■■■□□ 2.88
HDAC3-201ENST00000305264 FZD9O00144 591 aa33.01■■■□□ 2.87
HDAC3-201ENST00000305264 USP17L3A6NCW0 530 aa33■■■□□ 2.87
HDAC3-201ENST00000305264 USP17L4A6NCW7 530 aa33■■■□□ 2.87
HDAC3-201ENST00000305264 USP17L1Q7RTZ2 530 aa33■■■□□ 2.87
HDAC3-201ENST00000305264 MXD3Q9BW11 206 aa33■■■□□ 2.87
HDAC3-201ENST00000305264 STRIP1Q5VSL9 837 aa33■■■□□ 2.87
HDAC3-201ENST00000305264 PIH1D3Q9NQM4 214 aaKnown RBP33■■■□□ 2.87
HDAC3-201ENST00000305264 CXCL9Q07325 125 aa32.99■■■□□ 2.87
HDAC3-201ENST00000305264 DACT2Q5SW24 774 aa32.99■■■□□ 2.87
HDAC3-201ENST00000305264 WDR66Q8TBY9 1149 aa32.99■■■□□ 2.87
HDAC3-201ENST00000305264 ZNF541Q9H0D2 1346 aa32.99■■■□□ 2.87
HDAC3-201ENST00000305264 MFSD14BQ5SR56 506 aa32.98■■■□□ 2.87
HDAC3-201ENST00000305264 DCAF8L1A6NGE4 600 aa32.98■■■□□ 2.87
HDAC3-201ENST00000305264 TRIM6-TRIM34B2RNG4 842 aa32.98■■■□□ 2.87
HDAC3-201ENST00000305264 PSMD14O00487 310 aa32.98■■■□□ 2.87
HDAC3-201ENST00000305264 CERS5Q8N5B7 392 aa32.98■■■□□ 2.87
HDAC3-201ENST00000305264 SALL1Q9NSC2 1324 aa32.97■■■□□ 2.87
HDAC3-201ENST00000305264 ABCF2Q9UG63 623 aa32.97■■■□□ 2.87
HDAC3-201ENST00000305264 GRIK5Q16478 980 aa32.96■■■□□ 2.87
HDAC3-201ENST00000305264 SDSP20132 328 aa32.96■■■□□ 2.87
HDAC3-201ENST00000305264 BMP2KLQ5H9B9 411 aa32.96■■■□□ 2.87
HDAC3-201ENST00000305264 TBC1D22AQ8WUA7 517 aa32.96■■■□□ 2.87
HDAC3-201ENST00000305264 RILPL2Q969X0 211 aa32.96■■■□□ 2.87
HDAC3-201ENST00000305264 MYH7P12883 1935 aa32.95■■■□□ 2.87
HDAC3-201ENST00000305264 PRDX5P30044 214 aa32.95■■■□□ 2.87
HDAC3-201ENST00000305264 EIF6P56537 245 aaKnown RBP32.95■■■□□ 2.87
HDAC3-201ENST00000305264 CIAPIN1Q6FI81 312 aa32.95■■■□□ 2.87
HDAC3-201ENST00000305264 TTF1Q15361 905 aaPredicted RBP32.94■■■□□ 2.86
HDAC3-201ENST00000305264 CNTROBQ8N137 903 aa32.94■■■□□ 2.86
HDAC3-201ENST00000305264 EVI5LQ96CN4 794 aa32.94■■■□□ 2.86
HDAC3-201ENST00000305264 MAST2Q6P0Q8 1798 aa32.93■■■□□ 2.86
HDAC3-201ENST00000305264 VIL1P09327 827 aaKnown RBP32.93■■■□□ 2.86
HDAC3-201ENST00000305264 KBTBD3Q8NAB2 608 aa32.92■■■□□ 2.86
HDAC3-201ENST00000305264 IDH1O75874 414 aaKnown RBP32.92■■■□□ 2.86
HDAC3-201ENST00000305264 RSBN1LQ6PCB5 846 aaPredicted RBP32.92■■■□□ 2.86
HDAC3-201ENST00000305264 ZGPATQ8N5A5 531 aaKnown RBP32.92■■■□□ 2.86
HDAC3-201ENST00000305264 LRP2BPQ9P2M1 347 aa32.92■■■□□ 2.86
HDAC3-201ENST00000305264 FSD1Q9BTV5 496 aa32.91■■■□□ 2.86
HDAC3-201ENST00000305264 ZBTB12Q9Y330 459 aaPredicted RBP32.91■■■□□ 2.86
HDAC3-201ENST00000305264 FKBP1AP62942 108 aaKnown RBP32.9■■■□□ 2.86
HDAC3-201ENST00000305264 TNIP1Q15025 636 aa32.9■■■□□ 2.86
HDAC3-201ENST00000305264 LDHBP07195 334 aaKnown RBP32.89■■■□□ 2.86
HDAC3-201ENST00000305264 ERICH6Q7L0X2 663 aa32.89■■■□□ 2.86
HDAC3-201ENST00000305264 RAI14Q9P0K7 980 aa32.89■■■□□ 2.86
HDAC3-201ENST00000305264 GJA3Q9Y6H8 435 aa32.89■■■□□ 2.86
HDAC3-201ENST00000305264 CHGBP05060 677 aa32.89■■■□□ 2.85
HDAC3-201ENST00000305264 F8W031 263 aaPredicted RBP32.88■■■□□ 2.85
HDAC3-201ENST00000305264 SPTY2D1Q68D10 685 aaPredicted RBP32.87■■■□□ 2.85
HDAC3-201ENST00000305264 KIAA0825Q8IV33 1275 aa32.87■■■□□ 2.85
HDAC3-201ENST00000305264 ZNF384Q8TF68 577 aa32.87■■■□□ 2.85
HDAC3-201ENST00000305264 GMLQ99445 158 aa32.87■■■□□ 2.85
HDAC3-201ENST00000305264 ADAMTSL1Q8N6G6 1762 aa32.87■■■□□ 2.85
HDAC3-201ENST00000305264 MYO3BQ8WXR4 1341 aa32.87■■■□□ 2.85
HDAC3-201ENST00000305264 ZC3H4Q9UPT8 1303 aaKnown RBP32.87■■■□□ 2.85
HDAC3-201ENST00000305264 MECOMQ03112 1051 aa32.86■■■□□ 2.85
HDAC3-201ENST00000305264 MAP3K12Q12852 859 aa32.86■■■□□ 2.85
HDAC3-201ENST00000305264 SUGT1Q9Y2Z0 365 aa32.86■■■□□ 2.85
HDAC3-201ENST00000305264 SLFNL1Q499Z3 407 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms