RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 SYCP3Q8IZU3 236 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 TMX1Q9H3N1 280 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.45
MECP2-201ENST00000303391 PDE4BQ07343 736 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 TCERG1LQ5VWI1 586 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 LLPHQ9BRT6 129 aaKnown RBP12.27□□□□□ -0.45
MECP2-201ENST00000303391 GUCA1BQ9UMX6 200 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 CETN3O15182 167 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 SLC5A1P13866 664 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 PPP1R7Q15435 360 aa12.27□□□□□ -0.45
MECP2-201ENST00000303391 GSTA5Q7RTV2 222 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 SYCE1Q8N0S2 351 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 NOX5Q96PH1 765 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 IFNKQ9P0W0 207 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 NUP160Q12769 1436 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 HVCN1Q96D96 273 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 DDX27Q96GQ7 796 aaKnown RBP12.26□□□□□ -0.45
MECP2-201ENST00000303391 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
MECP2-201ENST00000303391 AOX1Q06278 1338 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 NUCKS1Q9H1E3 243 aaKnown RBP12.26□□□□□ -0.45
MECP2-201ENST00000303391 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
MECP2-201ENST00000303391 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 ZNF75DP51815 510 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
MECP2-201ENST00000303391 NESP48681 1621 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 IDEP14735 1019 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 RFC1P35251 1148 aaPredicted RBP12.26□□□□□ -0.45
MECP2-201ENST00000303391 IFT81Q8WYA0 676 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 EFCAB8A8MWE9 144 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 CABP4P57796 275 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 MUM1Q2TAK8 710 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 ESYT1Q9BSJ8 1104 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 ARHGEF12Q9NZN5 1544 aa12.26□□□□□ -0.45
MECP2-201ENST00000303391 ELF2Q15723 593 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 ODF2LQ9ULJ1 636 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 PPP1R12CQ9BZL4 782 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 KCNK9Q9NPC2 374 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 MICAL1Q8TDZ2 1067 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 PHACTR2O75167 634 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 ATF3P18847 181 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 CCDC144CPQ8IYA2 1237 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 VPS52Q8N1B4 723 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 SNAPC4Q5SXM2 1469 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 DENND2CQ68D51 928 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 BICD1Q96G01 975 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 SOS1Q07889 1333 aaPredicted RBP12.25□□□□□ -0.45
MECP2-201ENST00000303391 CFAP221Q4G0U5 840 aa12.25□□□□□ -0.45
MECP2-201ENST00000303391 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 MGEA5O60502 916 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 DBN1Q16643 649 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
MECP2-201ENST00000303391 CAPZA3Q96KX2 299 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
MECP2-201ENST00000303391 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
MECP2-201ENST00000303391 CALM1P0DP23 149 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 CALM2P0DP24 149 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 CALM3P0DP25 149 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 CCDC63Q8NA47 563 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 SYNCQ9H7C4 482 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.45
MECP2-201ENST00000303391 USP5P45974 858 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 LZTFL1Q9NQ48 299 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 TRIM75PA6NK02 468 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 RNF40O75150 1001 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 HPDP32754 393 aaPredicted RBP12.24□□□□□ -0.45
MECP2-201ENST00000303391 RNF216Q9NWF9 866 aaPredicted RBP12.24□□□□□ -0.45
MECP2-201ENST00000303391 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
MECP2-201ENST00000303391 PPP1R9BQ96SB3 815 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 CDK19Q9BWU1 502 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 GAS8O95995 478 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 ARHGEF2Q92974 986 aaKnown RBP12.23□□□□□ -0.45
MECP2-201ENST00000303391 ZBTB43O43298 467 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
MECP2-201ENST00000303391 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
MECP2-201ENST00000303391 DRC3Q9H069 523 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
MECP2-201ENST00000303391 SDSP20132 328 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 CCT2P78371 535 aaKnown RBP12.23□□□□□ -0.45
MECP2-201ENST00000303391 DNM1Q05193 864 aaKnown RBP12.23□□□□□ -0.45
MECP2-201ENST00000303391 IQUBQ8NA54 791 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
MECP2-201ENST00000303391 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms