RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
SHCBP1-201ENST00000303383 MAGEB6Q8N7X4 407 aa17.24■□□□□ 0.35
SHCBP1-201ENST00000303383 TAF6LQ9Y6J9 622 aa17.24■□□□□ 0.35
SHCBP1-201ENST00000303383 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
SHCBP1-201ENST00000303383 PRR5LQ6MZQ0 368 aa17.24■□□□□ 0.35
SHCBP1-201ENST00000303383 WWC3Q9ULE0 1092 aa17.24■□□□□ 0.35
SHCBP1-201ENST00000303383 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
SHCBP1-201ENST00000303383 C4AP0C0L4 1744 aa17.23■□□□□ 0.35
SHCBP1-201ENST00000303383 PLSCR1O15162 318 aa17.23■□□□□ 0.35
SHCBP1-201ENST00000303383 PTMSP20962 102 aa17.23■□□□□ 0.35
SHCBP1-201ENST00000303383 HAND2P61296 217 aa17.23■□□□□ 0.35
SHCBP1-201ENST00000303383 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 TAF1P21675 1872 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 GRAPQ13588 217 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 PROM2Q8N271 834 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 ZNF213O14771 459 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 AKAP11Q9UKA4 1901 aa17.22■□□□□ 0.35
SHCBP1-201ENST00000303383 PKP1Q13835 747 aa17.21■□□□□ 0.35
SHCBP1-201ENST00000303383 COL24A1Q17RW2 1714 aa17.21■□□□□ 0.35
SHCBP1-201ENST00000303383 FGAP02671 866 aa17.21■□□□□ 0.35
SHCBP1-201ENST00000303383 Q6ZUG5 572 aa17.21■□□□□ 0.35
SHCBP1-201ENST00000303383 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
SHCBP1-201ENST00000303383 ZNF804BA4D1E1 1349 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 E7EWF7 191 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 TRDNQ13061 729 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 STK3Q13188 491 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 EP400Q96L91 3159 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 MYH7P12883 1935 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 TPCN1Q9ULQ1 816 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
SHCBP1-201ENST00000303383 MBD4O95243 580 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 LARGE1O95461 756 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 ME3Q16798 604 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 NLGN1Q8N2Q7 840 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 FAM84BQ96KN1 310 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 ARAP2Q8WZ64 1704 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 BAG4O95429 457 aaKnown RBP17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 MCTP1Q6DN14 999 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 CYP7A1P22680 504 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 TM4SF1P30408 202 aa17.19■□□□□ 0.34
SHCBP1-201ENST00000303383 WDR33Q9C0J8 1336 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 BRF1Q92994 677 aa17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 TRAK2O60296 914 aa17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 STOX1Q6ZVD7 989 aa17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 NACAP1Q9BZK3 213 aa17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 NAPBQ9H115 298 aa17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 ALDH8A1Q9H2A2 487 aaPredicted RBP17.18■□□□□ 0.34
SHCBP1-201ENST00000303383 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 GJB2P29033 226 aa17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 GSE1Q14687 1217 aa17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 SEMA3EO15041 775 aa17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 TOB2Q14106 344 aaPredicted RBP17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 MIGA1Q8NAN2 632 aa17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
SHCBP1-201ENST00000303383 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 XDHP47989 1333 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 COL4A1P02462 1669 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 TCRBV5S4A2TA0A5A2 114 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 TDO2P48775 406 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 DDR1Q08345 913 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 LEMD3Q9Y2U8 911 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 GNAT2P19087 354 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 COL23A1Q86Y22 540 aaPredicted RBP17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
SHCBP1-201ENST00000303383 KLRK1P26718 216 aa17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 SKOR2Q2VWA4 1001 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 CHST3Q7LGC8 479 aa17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 FBXO33Q7Z6M2 555 aa17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 GZF1Q9H116 711 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 BRD1O95696 1058 aa17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 MCM5P33992 734 aa17.15■□□□□ 0.34
SHCBP1-201ENST00000303383 CASZ1Q86V15 1759 aa17.14■□□□□ 0.34
SHCBP1-201ENST00000303383 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
SHCBP1-201ENST00000303383 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
SHCBP1-201ENST00000303383 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
SHCBP1-201ENST00000303383 STX6O43752 255 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms