RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TXKP42681 527 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 TBC1D5Q92609 795 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 NACA2Q9H009 215 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
SCN9A-201ENST00000303354 ASXL2Q76L83 1435 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 SF3A3Q12874 501 aaKnown RBP eCLIP8.88□□□□□ -0.99
SCN9A-201ENST00000303354 AAMPQ13685 434 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 TXLNBQ8N3L3 684 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.88□□□□□ -0.99
SCN9A-201ENST00000303354 SH3BP5O60239 455 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 USO1O60763 962 aaKnown RBP8.88□□□□□ -0.99
SCN9A-201ENST00000303354 CCDC65Q8IXS2 484 aa8.88□□□□□ -0.99
SCN9A-201ENST00000303354 STK25O00506 426 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 SYKP43405 635 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 CBX1P83916 185 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PLCH2O75038 1416 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 RXRBP28702 533 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 MRPL50Q8N5N7 158 aaKnown RBP8.87□□□□□ -0.99
SCN9A-201ENST00000303354 KIF14Q15058 1648 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 KCNQ3O43525 872 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 BIRC3Q13489 604 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 OTUD7BQ6GQQ9 843 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PRPF38AQ8NAV1 312 aaKnown RBP8.87□□□□□ -0.99
SCN9A-201ENST00000303354 APOL6Q9BWW8 343 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PCDH11XQ9BZA7 1347 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PCDH11YQ9BZA8 1340 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 TTC30AQ86WT1 665 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 CAPZA3Q96KX2 299 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 TTC21AQ8NDW8 1320 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 KRT2P35908 639 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 DLGAP5Q15398 846 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PTPN14Q15678 1187 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 TTC22Q5TAA0 569 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PSDA5PKW4 1024 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-201ENST00000303354 SFPQP23246 707 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCN9A-201ENST00000303354 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-201ENST00000303354 DYMQ7RTS9 669 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 TICAM2Q86XR7 235 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 USP40Q9NVE5 1235 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 SLAIN2Q9P270 581 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 UBXN2AP68543 259 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PPP1R14CQ8TAE6 165 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 JAKMIP2Q96AA8 810 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 A0A1B0GUL7 405 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 PIK3AP1Q6ZUJ8 805 aa8.87□□□□□ -0.99
SCN9A-201ENST00000303354 DPY19L2Q6NUT2 758 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 ERMNQ8TAM6 284 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 RNF113AO15541 343 aaKnown RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 IL15P40933 162 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 UBN2Q6ZU65 1347 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 VWA3AA6NCI4 1184 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 GABPAQ06546 454 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 CCDC183Q5T5S1 534 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 SPAG5Q96R06 1193 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 NBPF7P0C2Y1 421 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 TNPO1Q92973 898 aaKnown RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 ANKRD2Q9GZV1 360 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 PLEKHA4Q9H4M7 779 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 XAGE2Q96GT9 111 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 PAFAH1B1P43034 410 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 TMCO3Q6UWJ1 677 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 EDC3Q96F86 508 aaKnown RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 TSNARE1Q96NA8 513 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 NDC80O14777 642 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 ERCC5P28715 1186 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 CCDC102BQ68D86 513 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 DCPSQ96C86 337 aaKnown RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 DBNDD1Q9H9R9 158 aa8.86□□□□□ -0.99
SCN9A-201ENST00000303354 TTF2Q9UNY4 1162 aaKnown RBP8.86□□□□□ -0.99
SCN9A-201ENST00000303354 PCF11O94913 1555 aaKnown RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 UBXN4Q92575 508 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 INCENPQ9NQS7 918 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 TESPA1A2RU30 521 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 DNM1Q05193 864 aaKnown RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 LRMPQ12912 555 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 UAP1Q16222 522 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 USPL1Q5W0Q7 1092 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 SMIM5Q71RC9 77 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 STAMQ92783 540 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 IMPG2Q9BZV3 1241 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 ERLIN1O75477 346 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 CALRP27797 417 aaKnown RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 KSR1Q8IVT5 923 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 TMX3Q96JJ7 454 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 ACTN2P35609 894 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 KARSQ15046 597 aaKnown RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 USTQ9Y2C2 406 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 UHRF1BP1LA0JNW5 1464 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 KIAA0586Q9BVV6 1533 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 GOLGA8HP0CJ92 632 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 GYG1P46976 350 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 KRT79Q5XKE5 535 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 CCDC25Q86WR0 208 aa8.85□□□□□ -0.99
SCN9A-201ENST00000303354 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-201ENST00000303354 SNAP25P60880 206 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms