RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 SNAP23O00161 211 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 NPHP1O15259 732 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 FOXP2O15409 715 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 IGSF3O75054 1194 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 BAG4O95429 457 aaKnown RBP12.6□□□□□ -0.39
CLP1-201ENST00000302731 RXRBP28702 533 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
CLP1-201ENST00000302731 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
CLP1-201ENST00000302731 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
CLP1-201ENST00000302731 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
CLP1-201ENST00000302731 ST5P78524 1137 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 GRAPQ13588 217 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 ALX1Q15699 326 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 ME3Q16798 604 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 SKOR2Q2VWA4 1001 aaPredicted RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 FBXO33Q7Z6M2 555 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 TPCN1Q9ULQ1 816 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 TAF1P21675 1872 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 WDR33Q9C0J8 1336 aaKnown RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 E7EWF7 191 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 FGAP02671 866 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 SERPINB2P05120 415 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 EXOSC10Q01780 885 aaKnown RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 PKP1Q13835 747 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 GSE1Q14687 1217 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 FAM84BQ96KN1 310 aaPredicted RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 SMC3Q9UQE7 1217 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
CLP1-201ENST00000302731 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
CLP1-201ENST00000302731 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
CLP1-201ENST00000302731 LARGE1O95461 756 aa12.58□□□□□ -0.4
CLP1-201ENST00000302731 GNAT2P19087 354 aa12.58□□□□□ -0.4
CLP1-201ENST00000302731 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
CLP1-201ENST00000302731 AIDAQ96BJ3 306 aa12.58□□□□□ -0.4
CLP1-201ENST00000302731 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.4
CLP1-201ENST00000302731 STRBPQ96SI9 672 aaKnown RBP12.58□□□□□ -0.4
CLP1-201ENST00000302731 MYO5AQ9Y4I1 1855 aaKnown RBP12.58□□□□□ -0.4
CLP1-201ENST00000302731 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 TRAK2O60296 914 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 GYG1P46976 350 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 CCDC83Q8IWF9 413 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 LEMD3Q9Y2U8 911 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 LAMA4Q16363 1823 aa12.57□□□□□ -0.4
CLP1-201ENST00000302731 KLRG2A4D1S0 409 aaPredicted RBP12.56□□□□□ -0.4
CLP1-201ENST00000302731 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
CLP1-201ENST00000302731 ZNF213O14771 459 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 APBA3O96018 575 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
CLP1-201ENST00000302731 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 COL9A3Q14050 684 aaPredicted RBP12.56□□□□□ -0.4
CLP1-201ENST00000302731 Q6ZUG5 572 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 C15orf52Q6ZUT6 534 aaKnown RBP12.56□□□□□ -0.4
CLP1-201ENST00000302731 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
CLP1-201ENST00000302731 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 HIBADHP31937 336 aaKnown RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 EVCP57679 992 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 XDHP47989 1333 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 COL1A1P02452 1464 aaPredicted RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 STX6O43752 255 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 BBOX1O75936 387 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 PDCP20941 246 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 GJB2P29033 226 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 DDR1Q08345 913 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 NCOA7Q8NI08 942 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 GTF3C6Q969F1 213 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 LLPHQ9BRT6 129 aaKnown RBP12.55□□□□□ -0.4
CLP1-201ENST00000302731 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
CLP1-201ENST00000302731 PFKFB2O60825 505 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 SYT1P21579 422 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 MCM5P33992 734 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
CLP1-201ENST00000302731 FGD1P98174 961 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
CLP1-201ENST00000302731 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
CLP1-201ENST00000302731 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
CLP1-201ENST00000302731 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
CLP1-201ENST00000302731 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
CLP1-201ENST00000302731 MBD4O95243 580 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms