RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
RFX3-201ENST00000302303 SNRKQ9NRH2 765 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 ECE2O60344 883 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 GLRX3O76003 335 aaKnown RBP11.6□□□□□ -0.55
RFX3-201ENST00000302303 UQCRFS1P1P0C7P4 283 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 GPR162Q16538 588 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 GORABQ5T7V8 394 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 TTC22Q5TAA0 569 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 ZNF804AQ7Z570 1209 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 PODNQ7Z5L7 613 aa11.6□□□□□ -0.55
RFX3-201ENST00000302303 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
RFX3-201ENST00000302303 PDS5AQ29RF7 1337 aaKnown RBP11.59□□□□□ -0.55
RFX3-201ENST00000302303 FAM205AQ6ZU69 1335 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 FZD9O00144 591 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 SEMA3EO15041 775 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
RFX3-201ENST00000302303 LMNB1P20700 586 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 CERS5Q8N5B7 392 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 ZNF384Q8TF68 577 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 MXD3Q9BW11 206 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 PIH1D3Q9NQM4 214 aaKnown RBP11.59□□□□□ -0.55
RFX3-201ENST00000302303 JAG2Q9Y219 1238 aa11.59□□□□□ -0.55
RFX3-201ENST00000302303 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 CHGBP05060 677 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 CXCL9Q07325 125 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 DACT2Q5SW24 774 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 DENND2AQ9ULE3 1009 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
RFX3-201ENST00000302303 GRIN3BO60391 1043 aa11.57□□□□□ -0.56
RFX3-201ENST00000302303 SDSP20132 328 aa11.57□□□□□ -0.56
RFX3-201ENST00000302303 GTF2IP78347 998 aa11.57□□□□□ -0.56
RFX3-201ENST00000302303 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
RFX3-201ENST00000302303 GMLQ99445 158 aa11.57□□□□□ -0.56
RFX3-201ENST00000302303 SALL1Q9NSC2 1324 aa11.57□□□□□ -0.56
RFX3-201ENST00000302303 GOLIM4O00461 696 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 ERC2O15083 957 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 VIL1P09327 827 aaKnown RBP11.56□□□□□ -0.56
RFX3-201ENST00000302303 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 BMP2KLQ5H9B9 411 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 STRIP1Q5VSL9 837 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
RFX3-201ENST00000302303 PAG1Q9NWQ8 432 aa11.56□□□□□ -0.56
RFX3-201ENST00000302303 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
RFX3-201ENST00000302303 MYO5AQ9Y4I1 1855 aaKnown RBP11.56□□□□□ -0.56
RFX3-201ENST00000302303 USP17L3A6NCW0 530 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 USP17L4A6NCW7 530 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 PSMD14O00487 310 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 RAD17O75943 681 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 PRDX5P30044 214 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 CHAF1AQ13111 956 aaPredicted RBP11.55□□□□□ -0.56
RFX3-201ENST00000302303 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 USP17L1Q7RTZ2 530 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 NIM1KQ8IY84 436 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 DNAJC2Q99543 621 aaKnown RBP11.55□□□□□ -0.56
RFX3-201ENST00000302303 PSME4Q14997 1843 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 ZNF541Q9H0D2 1346 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
RFX3-201ENST00000302303 FKBP1AP62942 108 aaKnown RBP11.55□□□□□ -0.56
RFX3-201ENST00000302303 KBTBD3Q8NAB2 608 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 WDR66Q8TBY9 1149 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 RNF181Q9P0P0 153 aa11.55□□□□□ -0.56
RFX3-201ENST00000302303 TCRBV5S4A2TA0A5A2 114 aa11.54□□□□□ -0.56
RFX3-201ENST00000302303 MFSD14BQ5SR56 506 aa11.54□□□□□ -0.56
RFX3-201ENST00000302303 JDP2Q8WYK2 163 aa11.54□□□□□ -0.56
RFX3-201ENST00000302303 EVI5LQ96CN4 794 aa11.54□□□□□ -0.56
RFX3-201ENST00000302303 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
RFX3-201ENST00000302303 DOCK2Q92608 1830 aa11.54□□□□□ -0.56
RFX3-201ENST00000302303 G3V3G9 751 aa11.53□□□□□ -0.56
RFX3-201ENST00000302303 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
RFX3-201ENST00000302303 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
RFX3-201ENST00000302303 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
RFX3-201ENST00000302303 NSUN4Q96CB9 384 aaKnown RBP11.53□□□□□ -0.56
RFX3-201ENST00000302303 IL25Q9H293 177 aa11.53□□□□□ -0.56
RFX3-201ENST00000302303 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.56
RFX3-201ENST00000302303 SHTN1A0MZ66 631 aa11.52□□□□□ -0.57
RFX3-201ENST00000302303 MECOMQ03112 1051 aa11.52□□□□□ -0.57
RFX3-201ENST00000302303 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
RFX3-201ENST00000302303 ADGRA1Q86SQ6 560 aa11.52□□□□□ -0.57
RFX3-201ENST00000302303 RILPL2Q969X0 211 aa11.52□□□□□ -0.57
RFX3-201ENST00000302303 ABCF2Q9UG63 623 aa11.52□□□□□ -0.57
RFX3-201ENST00000302303 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 CHMLP26374 656 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 ADD2P35612 726 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 TTF1Q15361 905 aaPredicted RBP11.51□□□□□ -0.57
RFX3-201ENST00000302303 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 SUGT1Q9Y2Z0 365 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
RFX3-201ENST00000302303 IDH1O75874 414 aaKnown RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 DDNO94850 711 aaPredicted RBP11.5□□□□□ -0.57
RFX3-201ENST00000302303 PDE6AP16499 860 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 DIXDC1Q155Q3 683 aa11.5□□□□□ -0.57
RFX3-201ENST00000302303 CNTROBQ8N137 903 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms