RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
SDC2-201ENST00000302190 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 NAPBQ9H115 298 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 IL2RBP14784 551 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 SLC9C2Q5TAH2 1124 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
SDC2-201ENST00000302190 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 JMYQ8N9B5 988 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 GPHNQ9NQX3 736 aaPredicted RBP16.29■□□□□ 0.2
SDC2-201ENST00000302190 RGPD1P0DJD0 1748 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
SDC2-201ENST00000302190 HOOK1Q9UJC3 728 aaKnown RBP16.29■□□□□ 0.2
SDC2-201ENST00000302190 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
SDC2-201ENST00000302190 CNNM3Q8NE01 707 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
SDC2-201ENST00000302190 UBXN4Q92575 508 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
SDC2-201ENST00000302190 CYP21A2P08686 494 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 TRIM22Q8IYM9 498 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 MAP4K1Q92918 833 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 TMEM51Q9NW97 253 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 AOX1Q06278 1338 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 TNNT3P45378 269 aaPredicted RBP16.28■□□□□ 0.2
SDC2-201ENST00000302190 ARID5BQ14865 1188 aa16.28■□□□□ 0.2
SDC2-201ENST00000302190 LRRC24Q50LG9 513 aa16.27■□□□□ 0.2
SDC2-201ENST00000302190 RAI14Q9P0K7 980 aa16.27■□□□□ 0.2
SDC2-201ENST00000302190 DNAI1Q9UI46 699 aa16.27■□□□□ 0.2
SDC2-201ENST00000302190 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
SDC2-201ENST00000302190 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
SDC2-201ENST00000302190 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
SDC2-201ENST00000302190 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.19
SDC2-201ENST00000302190 ZBTB22O15209 634 aa16.27■□□□□ 0.19
SDC2-201ENST00000302190 TAF5LO75529 589 aa16.27■□□□□ 0.19
SDC2-201ENST00000302190 TPM1P09493 284 aa16.27■□□□□ 0.19
SDC2-201ENST00000302190 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.19
SDC2-201ENST00000302190 PDLIM2Q96JY6 352 aa16.27■□□□□ 0.19
SDC2-201ENST00000302190 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.19
SDC2-201ENST00000302190 ZNF75DP51815 510 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 PHKBQ93100 1093 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
SDC2-201ENST00000302190 NAA30Q147X3 362 aaPredicted RBP16.26■□□□□ 0.19
SDC2-201ENST00000302190 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 ARGLU1Q9NWB6 273 aaPredicted RBP16.26■□□□□ 0.19
SDC2-201ENST00000302190 SPTLC2O15270 562 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 IARSP41252 1262 aaKnown RBP16.26■□□□□ 0.19
SDC2-201ENST00000302190 SYKP43405 635 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 POLA2Q14181 598 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 MRVI1Q9Y6F6 885 aa16.26■□□□□ 0.19
SDC2-201ENST00000302190 COL5A2P05997 1499 aaPredicted RBP16.25■□□□□ 0.19
SDC2-201ENST00000302190 NECTIN1Q15223 517 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 PI16Q6UXB8 463 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
SDC2-201ENST00000302190 PUS3Q9BZE2 481 aaKnown RBP16.25■□□□□ 0.19
SDC2-201ENST00000302190 CTAGE5O15320 804 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 SLC12A7Q9Y666 1083 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 SCRN1Q12765 414 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
SDC2-201ENST00000302190 GTF3C6Q969F1 213 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
SDC2-201ENST00000302190 MARCH6O60337 910 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 KBTBD3Q8NAB2 608 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 AKAP2Q9Y2D5 859 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 RNF113AO15541 343 aaKnown RBP16.24■□□□□ 0.19
SDC2-201ENST00000302190 RANBP6O60518 1105 aaKnown RBP16.24■□□□□ 0.19
SDC2-201ENST00000302190 IL15P40933 162 aaPredicted RBP16.24■□□□□ 0.19
SDC2-201ENST00000302190 UBASH3AP57075 661 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
SDC2-201ENST00000302190 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 TTC14Q96N46 770 aa16.24■□□□□ 0.19
SDC2-201ENST00000302190 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
SDC2-201ENST00000302190 AFMP43652 599 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 B4E1Z4 1266 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 ZSCAN25Q6NSZ9 544 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 SMTNL1A8MU46 457 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 HOXB7P09629 217 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 STX17P56962 302 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 CMTR1Q8N1G2 835 aaKnown RBP16.23■□□□□ 0.19
SDC2-201ENST00000302190 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
SDC2-201ENST00000302190 hCG_1642624A0A1W2PR95 340 aa16.22■□□□□ 0.19
SDC2-201ENST00000302190 E7EWF7 191 aa16.22■□□□□ 0.19
SDC2-201ENST00000302190 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
SDC2-201ENST00000302190 C11orf57Q6ZUT1 292 aaPredicted RBP16.22■□□□□ 0.19
SDC2-201ENST00000302190 CACTINQ8WUQ7 758 aaKnown RBP16.22■□□□□ 0.19
SDC2-201ENST00000302190 NACAP1Q9BZK3 213 aa16.22■□□□□ 0.19
SDC2-201ENST00000302190 CPDO75976 1380 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms