RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
SPRED1-201ENST00000299084 KCNK9Q9NPC2 374 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 MTUS1Q9ULD2 1270 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 DNM2P50570 870 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 MX1P20591 662 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 SSFA2P28290 1259 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 CCDC102BQ68D86 513 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 ASIC1P78348 528 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 SDCCAG8Q86SQ7 713 aaPredicted RBP16.13■□□□□ 0.17
SPRED1-201ENST00000299084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPRED1-201ENST00000299084 FAM47CQ5HY64 1035 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 RRAGBQ5VZM2 374 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 WAPLQ7Z5K2 1190 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
SPRED1-201ENST00000299084 STMN2Q93045 179 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
SPRED1-201ENST00000299084 NOX5Q96PH1 765 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 NAIPQ13075 1403 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 PDE3AQ14432 1141 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 USHBP1Q8N6Y0 703 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 CHMP6Q96FZ7 201 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 DDX27Q96GQ7 796 aaKnown RBP16.12■□□□□ 0.17
SPRED1-201ENST00000299084 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
SPRED1-201ENST00000299084 ZSCAN30Q86W11 494 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 PPFIA2O75334 1257 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 SNW1Q13573 536 aaKnown RBP16.12■□□□□ 0.17
SPRED1-201ENST00000299084 MTRF1LQ9UGC7 380 aaKnown RBP16.12■□□□□ 0.17
SPRED1-201ENST00000299084 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 MSH6P52701 1360 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 PSMA7O14818 248 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 AFMP43652 599 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 ZNF449Q6P9G9 518 aa16.12■□□□□ 0.17
SPRED1-201ENST00000299084 SUDS3Q9H7L9 328 aaPredicted RBP16.11■□□□□ 0.17
SPRED1-201ENST00000299084 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
SPRED1-201ENST00000299084 MCM5P33992 734 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 SEL1L2Q5TEA6 688 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
SPRED1-201ENST00000299084 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 RTN1Q16799 776 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 ZBTB9Q96C00 473 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
SPRED1-201ENST00000299084 HAND2P61296 217 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 NEK11Q8NG66 645 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 SKA2Q8WVK7 121 aaPredicted RBP16.11■□□□□ 0.17
SPRED1-201ENST00000299084 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 NEMFO60524 1076 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 NUDT16Q96DE0 195 aaKnown RBP16.11■□□□□ 0.17
SPRED1-201ENST00000299084 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
SPRED1-201ENST00000299084 CCDC169A6NNP5 214 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 STMN1P16949 149 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 SLC12A2P55011 1212 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 FBXW4P57775 412 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 PPFIA1Q13136 1202 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 TMTC4Q5T4D3 741 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 DKC1O60832 514 aaKnown RBP eCLIP16.1■□□□□ 0.17
SPRED1-201ENST00000299084 ZBTB33Q86T24 672 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
SPRED1-201ENST00000299084 HVCN1Q96D96 273 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 NUCB1Q02818 461 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 ATP5DP30049 168 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 INPP1P49441 399 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 KRT79Q5XKE5 535 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 RTEL1Q9NZ71 1219 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 ZNF853P0CG23 659 aa16.1■□□□□ 0.17
SPRED1-201ENST00000299084 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
SPRED1-201ENST00000299084 MAGEB6P1A0A0J9YX57 407 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 SETSIPP0DME0 302 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 RSRC1Q96IZ7 334 aaKnown RBP16.09■□□□□ 0.17
SPRED1-201ENST00000299084 VCX3BQ9H321 246 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 LMCD1Q9NZU5 365 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 MAP3K2Q9Y2U5 619 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
SPRED1-201ENST00000299084 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
SPRED1-201ENST00000299084 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 BICDL2A1A5D9 508 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 CEP85LQ5SZL2 805 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 BRD4O60885 1362 aaPredicted RBP16.09■□□□□ 0.17
SPRED1-201ENST00000299084 CASC4Q6P4E1 433 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 MED10Q9BTT4 135 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 PFDN6O15212 129 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 RPS6KA2Q15349 733 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 SPDYE2BA6NHP3 402 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 FOXO3O43524 673 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 SPDYE6P0CI01 402 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 MCM6Q14566 821 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 PKD2L1Q9P0L9 805 aa16.09■□□□□ 0.17
SPRED1-201ENST00000299084 XPAP23025 273 aaPredicted RBP16.08■□□□□ 0.17
SPRED1-201ENST00000299084 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.17
SPRED1-201ENST00000299084 ORC3Q9UBD5 711 aaPredicted RBP16.08■□□□□ 0.17
SPRED1-201ENST00000299084 IVLP07476 585 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms