RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
FNDC1-201ENST00000297267 BAG3O95817 575 aa17.55■□□□□ 0.4
FNDC1-201ENST00000297267 PPP1R14CQ8TAE6 165 aa17.55■□□□□ 0.4
FNDC1-201ENST00000297267 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
FNDC1-201ENST00000297267 KRT9P35527 623 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 CETN2P41208 172 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 USP26Q9BXU7 913 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 FANCAO15360 1455 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 UAP1Q16222 522 aaPredicted RBP17.54■□□□□ 0.4
FNDC1-201ENST00000297267 LGR6Q9HBX8 967 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 CCDC114Q96M63 670 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
FNDC1-201ENST00000297267 MNAT1P51948 309 aa17.54■□□□□ 0.4
FNDC1-201ENST00000297267 CHMLP26374 656 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 KIAA0753Q2KHM9 967 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 BLZF1Q9H2G9 400 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
FNDC1-201ENST00000297267 VAMP4O75379 141 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 LETM2Q2VYF4 491 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 UBLCP1Q8WVY7 318 aaPredicted RBP17.53■□□□□ 0.4
FNDC1-201ENST00000297267 CTAGE9A4FU28 777 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 MBD4O95243 580 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 KCNK9Q9NPC2 374 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 SPAG5Q96R06 1193 aa17.53■□□□□ 0.4
FNDC1-201ENST00000297267 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
FNDC1-201ENST00000297267 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
FNDC1-201ENST00000297267 C10orf67Q8IYJ2 551 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 TBC1D5Q92609 795 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 SYCP2Q9BX26 1530 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 CTAGE15A4D2H0 777 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 CTAGE8P0CG41 777 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 HPDP32754 393 aaPredicted RBP17.52■□□□□ 0.4
FNDC1-201ENST00000297267 CTAGE6Q86UF2 777 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 CTAGE4Q8IX94 777 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 HSPA2P54652 639 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 PIK3AP1Q6ZUJ8 805 aa17.52■□□□□ 0.4
FNDC1-201ENST00000297267 KRT5P13647 590 aa17.52■□□□□ 0.39
FNDC1-201ENST00000297267 CCDC160A6NGH7 325 aa17.52■□□□□ 0.39
FNDC1-201ENST00000297267 DYNC1I1O14576 645 aa17.52■□□□□ 0.39
FNDC1-201ENST00000297267 CEP112Q8N8E3 955 aa17.52■□□□□ 0.39
FNDC1-201ENST00000297267 KRT23Q9C075 422 aa17.52■□□□□ 0.39
FNDC1-201ENST00000297267 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.39
FNDC1-201ENST00000297267 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
FNDC1-201ENST00000297267 BMS1Q14692 1282 aaKnown RBP17.51■□□□□ 0.39
FNDC1-201ENST00000297267 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 TRIM31Q9BZY9 425 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 JAK2O60674 1132 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 KIF2AO00139 706 aaPredicted RBP17.51■□□□□ 0.39
FNDC1-201ENST00000297267 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 TMEM87AQ8NBN3 555 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 EYA1Q99502 592 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 PAXBP1Q9Y5B6 917 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 USH1GQ495M9 461 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 FAM114A1Q8IWE2 563 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
FNDC1-201ENST00000297267 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
FNDC1-201ENST00000297267 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 CEP57Q86XR8 500 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 CAPN2P17655 700 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 FSD2A1L4K1 749 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 PLCB3Q01970 1234 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 BEND3Q5T5X7 828 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 ESR2Q92731 530 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
FNDC1-201ENST00000297267 SLC27A2O14975 620 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 CDC37L1Q7L3B6 337 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 CALCOCO1Q9P1Z2 691 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 TCP10Q12799 353 aa17.5■□□□□ 0.39
FNDC1-201ENST00000297267 NAA15Q9BXJ9 866 aaKnown RBP17.5■□□□□ 0.39
FNDC1-201ENST00000297267 A0A087WWV3 80 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 KRBA2Q6ZNG9 492 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.49■□□□□ 0.39
FNDC1-201ENST00000297267 FCHSD1Q86WN1 690 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 EHMT1Q9H9B1 1298 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 DYMQ7RTS9 669 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 KCNG4Q8TDN1 519 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 TCHPQ9BT92 498 aa17.49■□□□□ 0.39
FNDC1-201ENST00000297267 ABCC1P33527 1531 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 GOLGA8FQ08AF8 430 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 GOLGA8DPQ0D2H9 430 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
FNDC1-201ENST00000297267 MCM3P25205 808 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 SNX14Q9Y5W7 946 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 GJA3Q9Y6H8 435 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 FAM13AO94988 1023 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 PKP1Q13835 747 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 MRPS9P82933 396 aaKnown RBP17.48■□□□□ 0.39
FNDC1-201ENST00000297267 UVSSAQ2YD98 709 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 FAM47AQ5JRC9 791 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 CUL7Q14999 1698 aa17.48■□□□□ 0.39
FNDC1-201ENST00000297267 ARFGAP3Q9NP61 516 aa17.47■□□□□ 0.39
FNDC1-201ENST00000297267 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
FNDC1-201ENST00000297267 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
FNDC1-201ENST00000297267 ZBTB40Q9NUA8 1239 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 234.2 ms