RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 SPATS2LQ9NUQ6 558 aaKnown RBP13.99□□□□□ -0.17
SNRK-201ENST00000296088 IMPACTQ9P2X3 320 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 WHAMMQ8TF30 809 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 KIFAP3Q92845 792 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 ZMAT2Q96NC0 199 aaKnown RBP13.99□□□□□ -0.17
SNRK-201ENST00000296088 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 FAM204AQ9H8W3 233 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 SPTLC2O15270 562 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 PPP2R5EQ16537 467 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 DNAJC25Q9H1X3 360 aa13.99□□□□□ -0.17
SNRK-201ENST00000296088 TSPY2A6NKD2 308 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 UBXN1Q04323 297 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 WTAPQ15007 396 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 MAK16Q9BXY0 300 aaKnown RBP13.98□□□□□ -0.17
SNRK-201ENST00000296088 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 CHMP4BP1P59074 171 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 SLC4A8Q2Y0W8 1093 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 HHATQ5VTY9 493 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 UBL4BQ8N7F7 174 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 ALG1Q9BT22 464 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 ZNF131P52739 623 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 MYL5Q02045 173 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 KRT79Q5XKE5 535 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 TOM1L2Q6ZVM7 507 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 GOLGA6BA6NDN3 693 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 STK10O94804 968 aaKnown RBP13.98□□□□□ -0.17
SNRK-201ENST00000296088 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
SNRK-201ENST00000296088 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
SNRK-201ENST00000296088 CCDC25Q86WR0 208 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 TBC1D31Q96DN5 1066 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
SNRK-201ENST00000296088 NCBP1Q09161 790 aaKnown RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 PDE1CQ14123 709 aaPredicted RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 ESR2Q92731 530 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 CACYBPQ9HB71 228 aaKnown RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 HAUS2Q9NVX0 235 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 PTGS1P23219 599 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 ITIH3Q06033 890 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 BANK1Q8NDB2 785 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 P3H4Q92791 437 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 C6orf50Q9HD87 102 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 DBF4Q9UBU7 674 aaPredicted RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 TROVE2P10155 538 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNRK-201ENST00000296088 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 ZNF354CQ86Y25 554 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 MYRIPQ8NFW9 859 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 FAF1Q9UNN5 650 aaPredicted RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 RTEL1-TNFRSF6BF6WH68 1400 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 ESCO1Q5FWF5 840 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 CYP26C1Q6V0L0 522 aa13.97□□□□□ -0.17
SNRK-201ENST00000296088 CRNKL1Q9BZJ0 848 aaKnown RBP13.97□□□□□ -0.17
SNRK-201ENST00000296088 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 RUFY3Q7L099 469 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 MICU3Q86XE3 530 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 IQUBQ8NA54 791 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 MICAL1Q8TDZ2 1067 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 ARHGAP45Q92619 1136 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 IL16Q14005 1332 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 BRD3Q15059 726 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 CCDC117Q8IWD4 279 aaPredicted RBP13.96□□□□□ -0.17
SNRK-201ENST00000296088 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 MUM1Q2TAK8 710 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 CDK19Q9BWU1 502 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 LZTFL1Q9NQ48 299 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
SNRK-201ENST00000296088 SMIM23A6NLE4 172 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 EVI5O60447 810 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 RLBP1P12271 317 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 AFMP43652 599 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 RTN1Q16799 776 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 GTF3C6Q969F1 213 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 PRAM1Q96QH2 718 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 TEX13AQ9BXU3 409 aaPredicted RBP13.96□□□□□ -0.18
SNRK-201ENST00000296088 STK24Q9Y6E0 443 aa13.96□□□□□ -0.18
SNRK-201ENST00000296088 SYCE1Q8N0S2 351 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 ZNF830Q96NB3 372 aaPredicted RBP13.95□□□□□ -0.18
SNRK-201ENST00000296088 RRAGDQ9NQL2 400 aaPredicted RBP13.95□□□□□ -0.18
SNRK-201ENST00000296088 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 PDCD2Q16342 344 aaPredicted RBP13.95□□□□□ -0.18
SNRK-201ENST00000296088 GEN1Q17RS7 908 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 APBA1Q02410 837 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 LRRD1A4D1F6 860 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 LMOD1P29536 600 aaPredicted RBP13.95□□□□□ -0.18
SNRK-201ENST00000296088 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
SNRK-201ENST00000296088 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
SNRK-201ENST00000296088 ERCC3P19447 782 aa13.94□□□□□ -0.18
SNRK-201ENST00000296088 HPDP32754 393 aaPredicted RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 ZGPATQ8N5A5 531 aaKnown RBP13.94□□□□□ -0.18
SNRK-201ENST00000296088 NOX5Q96PH1 765 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms