RNA–Protein interactions for RNA: ENST00000296046.3

CPA3-201, Transcript of carboxypeptidase A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA3, Length 1,795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3-201ENST00000296046 TRIM11Q96F44 468 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 NACA2Q9H009 215 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.91□□□□□ -1.3
CPA3-201ENST00000296046 CHIC2Q9UKJ5 165 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 TMCC3Q9ULS5 477 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 BARX2Q9UMQ3 279 aaPredicted RBP6.91□□□□□ -1.3
CPA3-201ENST00000296046 TRAK1Q9UPV9 953 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 USTQ9Y2C2 406 aa6.91□□□□□ -1.3
CPA3-201ENST00000296046 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 NPHP1O15259 732 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 HIP1RO75146 1068 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 SASH1O94885 1247 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 SNUPNO95149 360 aaKnown RBP6.9□□□□□ -1.3
CPA3-201ENST00000296046 MMEP08473 750 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 HOXD10P28358 340 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
CPA3-201ENST00000296046 XPCQ01831 940 aaPredicted RBP6.9□□□□□ -1.3
CPA3-201ENST00000296046 TAF7Q15545 349 aaPredicted RBP6.9□□□□□ -1.3
CPA3-201ENST00000296046 DBN1Q16643 649 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 TSGA10IPQ3SY00 556 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 MORN1Q5T089 497 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 DUSP27Q5VZP5 1158 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 NYAP1Q6ZVC0 841 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 CCDC80Q76M96 950 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 SKAP1Q86WV1 359 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 TRIML1Q8N9V2 468 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 HDAC7Q8WUI4 952 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 GIMAP1Q8WWP7 306 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 DNAAF4Q8WXU2 420 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 FAXDC2Q96IV6 333 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 DHRS1Q96LJ7 313 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 RPS6KC1Q96S38 1066 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 EXOC1Q9NV70 894 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 CLIP2Q9UDT6 1046 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 CCDC39Q9UFE4 941 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 ZNF652Q9Y2D9 606 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 ATP8A1Q9Y2Q0 1164 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 TMEM98Q9Y2Y6 226 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 N6AMT1Q9Y5N5 214 aa6.9□□□□□ -1.3
CPA3-201ENST00000296046 MAFBQ9Y5Q3 323 aaPredicted RBP6.9□□□□□ -1.3
CPA3-201ENST00000296046 EIF4G3O43432 1585 aaKnown RBP6.9□□□□□ -1.3
CPA3-201ENST00000296046 BHMG1C9JSJ3 638 aaPredicted RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 MYO1CO00159 1063 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 SMC2O95347 1197 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 HOXA10P31260 410 aaPredicted RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 MAN1A1P33908 653 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 CLK1P49759 484 aaKnown RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 HDGFP51858 240 aaKnown RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 SH3BGRP55822 239 aaPredicted RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 EIF2B5Q13144 721 aaKnown RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 TRIM29Q14134 588 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 PREPLQ4J6C6 727 aaPredicted RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 RNF20Q5VTR2 975 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 RETREG3Q86VR2 466 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 CCDC65Q8IXS2 484 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 CLASRPQ8N2M8 674 aaKnown RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 CHCHD4Q8N4Q1 142 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 NBPF15Q8N660 670 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 RNF214Q8ND24 703 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 STAG1Q8WVM7 1258 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 IWS1Q96ST2 819 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 YIPF2Q9BWQ6 316 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 TRIM6Q9C030 488 aaPredicted RBP6.9□□□□□ -1.31
CPA3-201ENST00000296046 MUC3BQ9H195 1237 aa6.9□□□□□ -1.31
CPA3-201ENST00000296046 TMEM110-MUSTN1A8MSY1 372 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 MYO1BO43795 1136 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 RNF40O75150 1001 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 NEBLO76041 1014 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 CYP2C19P33261 490 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 NUCB2P80303 420 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 DEUP1Q05D60 604 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 PKN1Q16512 942 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 C8orf34Q49A92 452 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 IQCEQ6IPM2 695 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 TXLNBQ8N3L3 684 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 LARGE2Q8N3Y3 721 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 UHMK1Q8TAS1 419 aaKnown RBP6.89□□□□□ -1.31
CPA3-201ENST00000296046 GOLGA1Q92805 767 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 MIEF2Q96C03 454 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 VMP1Q96GC9 406 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 CDK5RAP3Q96JB5 506 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 FAM81BQ96LP2 452 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 TRERF1Q96PN7 1200 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 NAP1L4Q99733 375 aaKnown RBP6.89□□□□□ -1.31
CPA3-201ENST00000296046 MAK16Q9BXY0 300 aaKnown RBP6.89□□□□□ -1.31
CPA3-201ENST00000296046 QTRT2Q9H974 415 aaKnown RBP6.89□□□□□ -1.31
CPA3-201ENST00000296046 COMMD8Q9NX08 183 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 CHMP5Q9NZZ3 219 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 SPATA7Q9P0W8 599 aa6.89□□□□□ -1.31
CPA3-201ENST00000296046 IBTKQ9P2D0 1353 aaPredicted RBP6.89□□□□□ -1.31
CPA3-201ENST00000296046 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
CPA3-201ENST00000296046 RIMBP3CA6NJZ7 1639 aa6.88□□□□□ -1.31
CPA3-201ENST00000296046 RIMBP3BA6NNM3 1639 aa6.88□□□□□ -1.31
CPA3-201ENST00000296046 RIMBP3Q9UFD9 1639 aa6.88□□□□□ -1.31
CPA3-201ENST00000296046 ZSCAN9O15535 394 aaPredicted RBP6.88□□□□□ -1.31
CPA3-201ENST00000296046 FMNL1O95466 1100 aaPredicted RBP6.88□□□□□ -1.31
CPA3-201ENST00000296046 CD53P19397 219 aa6.88□□□□□ -1.31
CPA3-201ENST00000296046 TPP2P29144 1249 aaPredicted RBP6.88□□□□□ -1.31
CPA3-201ENST00000296046 ZNF131P52739 623 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms