RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 FRAT2O75474 233 aaPredicted RBP33.88■■■■□ 3.01
CHCHD4-201ENST00000295767 PI16Q6UXB8 463 aa33.88■■■■□ 3.01
CHCHD4-201ENST00000295767 PI4K2BQ8TCG2 481 aa33.88■■■■□ 3.01
CHCHD4-201ENST00000295767 ZNRF3Q9ULT6 936 aa33.88■■■■□ 3.01
CHCHD4-201ENST00000295767 SEMA3EO15041 775 aa33.87■■■■□ 3.01
CHCHD4-201ENST00000295767 C9orf131Q5VYM1 1079 aa33.87■■■■□ 3.01
CHCHD4-201ENST00000295767 KCNQ5Q9NR82 932 aa33.87■■■■□ 3.01
CHCHD4-201ENST00000295767 ZBTB22O15209 634 aa33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 BOLA2Q9H3K6 86 aa33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 OSBPL3Q9H4L5 887 aa33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 HMG20BQ9P0W2 317 aa33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 MYO5AQ9Y4I1 1855 aaKnown RBP33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 SNRKQ9NRH2 765 aa33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 DENND2AQ9ULE3 1009 aa33.86■■■■□ 3.01
CHCHD4-201ENST00000295767 AOX1Q06278 1338 aa33.85■■■■□ 3.01
CHCHD4-201ENST00000295767 ERC2O15083 957 aa33.85■■■■□ 3.01
CHCHD4-201ENST00000295767 RGS3P49796 1198 aa33.85■■■■□ 3.01
CHCHD4-201ENST00000295767 SPATA5Q8NB90 893 aa33.85■■■■□ 3.01
CHCHD4-201ENST00000295767 JAG2Q9Y219 1238 aa33.85■■■■□ 3.01
CHCHD4-201ENST00000295767 CHAF1AQ13111 956 aaPredicted RBP33.84■■■■□ 3.01
CHCHD4-201ENST00000295767 NDUFB9Q9Y6M9 179 aa33.84■■■■□ 3.01
CHCHD4-201ENST00000295767 GLRX3O76003 335 aaKnown RBP33.83■■■■□ 3.01
CHCHD4-201ENST00000295767 GTF2IP78347 998 aa33.83■■■■□ 3.01
CHCHD4-201ENST00000295767 FZD9O00144 591 aa33.82■■■■□ 3.01
CHCHD4-201ENST00000295767 PDS5AQ29RF7 1337 aaKnown RBP33.82■■■■□ 3.01
CHCHD4-201ENST00000295767 AK9Q5TCS8 1911 aa33.82■■■■□ 3
CHCHD4-201ENST00000295767 ZAP70P43403 619 aa33.82■■■■□ 3
CHCHD4-201ENST00000295767 FAM205AQ6ZU69 1335 aa33.82■■■■□ 3
CHCHD4-201ENST00000295767 DOCK2Q92608 1830 aa33.81■■■■□ 3
CHCHD4-201ENST00000295767 RAD17O75943 681 aa33.81■■■■□ 3
CHCHD4-201ENST00000295767 TTLL5Q6EMB2 1281 aa33.81■■■■□ 3
CHCHD4-201ENST00000295767 FBXW7Q969H0 707 aa33.81■■■■□ 3
CHCHD4-201ENST00000295767 DNAJC2Q99543 621 aaKnown RBP33.81■■■■□ 3
CHCHD4-201ENST00000295767 HAUS7Q99871 368 aa33.81■■■■□ 3
CHCHD4-201ENST00000295767 USP17L3A6NCW0 530 aa33.79■■■■□ 3
CHCHD4-201ENST00000295767 USP17L4A6NCW7 530 aa33.79■■■■□ 3
CHCHD4-201ENST00000295767 CXCL9Q07325 125 aa33.79■■■■□ 3
CHCHD4-201ENST00000295767 USP17L1Q7RTZ2 530 aa33.79■■■■□ 3
CHCHD4-201ENST00000295767 STRIP1Q5VSL9 837 aa33.79■■■■□ 3
CHCHD4-201ENST00000295767 ZNF541Q9H0D2 1346 aa33.78■■■■□ 3
CHCHD4-201ENST00000295767 EDC3Q96F86 508 aaKnown RBP33.78■■■■□ 3
CHCHD4-201ENST00000295767 CYP2E1P05181 493 aaPredicted RBP33.77■■■■□ 3
CHCHD4-201ENST00000295767 EIF6P56537 245 aaKnown RBP33.77■■■■□ 3
CHCHD4-201ENST00000295767 CIAPIN1Q6FI81 312 aa33.77■■■■□ 3
CHCHD4-201ENST00000295767 WDR66Q8TBY9 1149 aa33.77■■■■□ 3
CHCHD4-201ENST00000295767 MYH7P12883 1935 aa33.77■■■■□ 3
CHCHD4-201ENST00000295767 PSMD14O00487 310 aa33.76■■■■□ 3
CHCHD4-201ENST00000295767 MAP4K4O95819 1239 aaPredicted RBP33.76■■■■□ 3
CHCHD4-201ENST00000295767 DACT2Q5SW24 774 aa33.76■■■■□ 3
CHCHD4-201ENST00000295767 TTC22Q5TAA0 569 aa33.76■■■■□ 3
CHCHD4-201ENST00000295767 ANTXR1Q9H6X2 564 aa33.76■■■■□ 3
CHCHD4-201ENST00000295767 MXD3Q9BW11 206 aa33.75■■■□□ 2.99
CHCHD4-201ENST00000295767 GOLIM4O00461 696 aa33.75■■■□□ 2.99
CHCHD4-201ENST00000295767 MFSD14BQ5SR56 506 aa33.75■■■□□ 2.99
CHCHD4-201ENST00000295767 TBC1D9Q6ZT07 1266 aa33.75■■■□□ 2.99
CHCHD4-201ENST00000295767 PAG1Q9NWQ8 432 aa33.75■■■□□ 2.99
CHCHD4-201ENST00000295767 SALL1Q9NSC2 1324 aa33.74■■■□□ 2.99
CHCHD4-201ENST00000295767 CERS5Q8N5B7 392 aa33.74■■■□□ 2.99
CHCHD4-201ENST00000295767 TBC1D22AQ8WUA7 517 aa33.74■■■□□ 2.99
CHCHD4-201ENST00000295767 VIL1P09327 827 aaKnown RBP33.73■■■□□ 2.99
CHCHD4-201ENST00000295767 GSPT1P15170 499 aaKnown RBP33.73■■■□□ 2.99
CHCHD4-201ENST00000295767 TNIP1Q15025 636 aa33.72■■■□□ 2.99
CHCHD4-201ENST00000295767 PIH1D3Q9NQM4 214 aaKnown RBP33.72■■■□□ 2.99
CHCHD4-201ENST00000295767 MAST2Q6P0Q8 1798 aa33.72■■■□□ 2.99
CHCHD4-201ENST00000295767 ZC3H4Q9UPT8 1303 aaKnown RBP33.72■■■□□ 2.99
CHCHD4-201ENST00000295767 ABCF2Q9UG63 623 aa33.71■■■□□ 2.99
CHCHD4-201ENST00000295767 FKBP1AP62942 108 aaKnown RBP33.71■■■□□ 2.99
CHCHD4-201ENST00000295767 RSBN1LQ6PCB5 846 aaPredicted RBP33.71■■■□□ 2.99
CHCHD4-201ENST00000295767 TTF1Q15361 905 aaPredicted RBP33.7■■■□□ 2.99
CHCHD4-201ENST00000295767 GRIK5Q16478 980 aa33.7■■■□□ 2.99
CHCHD4-201ENST00000295767 ZGPATQ8N5A5 531 aaKnown RBP33.7■■■□□ 2.99
CHCHD4-201ENST00000295767 PRDX5P30044 214 aa33.69■■■□□ 2.98
CHCHD4-201ENST00000295767 ZBTB12Q9Y330 459 aaPredicted RBP33.69■■■□□ 2.98
CHCHD4-201ENST00000295767 GJA3Q9Y6H8 435 aa33.69■■■□□ 2.98
CHCHD4-201ENST00000295767 TRIM6-TRIM34B2RNG4 842 aa33.68■■■□□ 2.98
CHCHD4-201ENST00000295767 MYO3BQ8WXR4 1341 aa33.67■■■□□ 2.98
CHCHD4-201ENST00000295767 GPC2Q8N158 579 aa33.67■■■□□ 2.98
CHCHD4-201ENST00000295767 LRP2BPQ9P2M1 347 aa33.67■■■□□ 2.98
CHCHD4-201ENST00000295767 MYH2Q9UKX2 1941 aa33.66■■■□□ 2.98
CHCHD4-201ENST00000295767 EVI5LQ96CN4 794 aa33.66■■■□□ 2.98
CHCHD4-201ENST00000295767 GMLQ99445 158 aa33.66■■■□□ 2.98
CHCHD4-201ENST00000295767 ADAMTSL1Q8N6G6 1762 aa33.66■■■□□ 2.98
CHCHD4-201ENST00000295767 LDHBP07195 334 aaKnown RBP33.65■■■□□ 2.98
CHCHD4-201ENST00000295767 SPTY2D1Q68D10 685 aaPredicted RBP33.65■■■□□ 2.98
CHCHD4-201ENST00000295767 ERICH6Q7L0X2 663 aa33.65■■■□□ 2.98
CHCHD4-201ENST00000295767 CNTROBQ8N137 903 aa33.65■■■□□ 2.98
CHCHD4-201ENST00000295767 KBTBD3Q8NAB2 608 aa33.65■■■□□ 2.98
CHCHD4-201ENST00000295767 RILPL2Q969X0 211 aa33.65■■■□□ 2.98
CHCHD4-201ENST00000295767 IDH1O75874 414 aaKnown RBP33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 DDNO94850 711 aaPredicted RBP33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 KIAA0825Q8IV33 1275 aa33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 AGBL3Q8NEM8 1001 aa33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 SUGT1Q9Y2Z0 365 aa33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 F8W031 263 aaPredicted RBP33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 SDSP20132 328 aa33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 BMP2KLQ5H9B9 411 aa33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 RAI14Q9P0K7 980 aa33.64■■■□□ 2.98
CHCHD4-201ENST00000295767 GMPSP49915 693 aaPredicted RBP33.62■■■□□ 2.97
CHCHD4-201ENST00000295767 FSD1Q9BTV5 496 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms