RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
LRRC58-201ENST00000295628 NFE2L2Q16236 605 aa18.86■□□□□ 0.61
LRRC58-201ENST00000295628 BAG1Q99933 345 aaPredicted RBP18.85■□□□□ 0.61
LRRC58-201ENST00000295628 TNNC1P63316 161 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 TMPOP42166 694 aaKnown RBP18.85■□□□□ 0.61
LRRC58-201ENST00000295628 SMARCC2Q8TAQ2 1214 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 STX17P56962 302 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 RTN1Q16799 776 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 SYT10Q6XYQ8 523 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 PHLDB2Q86SQ0 1253 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 PLIN2Q99541 437 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 C6orf50Q9HD87 102 aa18.85■□□□□ 0.61
LRRC58-201ENST00000295628 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 PTPRGP23470 1445 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 KCNG4Q8TDN1 519 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 STK38LQ9Y2H1 464 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 CASC4Q6P4E1 433 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 MRPL46Q9H2W6 279 aaKnown RBP18.84■□□□□ 0.61
LRRC58-201ENST00000295628 MAP3K2Q9Y2U5 619 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 TTLL3Q9Y4R7 772 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 RUFY3Q7L099 469 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 USP48Q86UV5 1035 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
LRRC58-201ENST00000295628 SPDYE3A6NKU9 549 aa18.83■□□□□ 0.61
LRRC58-201ENST00000295628 ZBTB43O43298 467 aa18.83■□□□□ 0.61
LRRC58-201ENST00000295628 TBC1D9Q6ZT07 1266 aa18.83■□□□□ 0.61
LRRC58-201ENST00000295628 RNF10Q8N5U6 811 aaKnown RBP18.83■□□□□ 0.61
LRRC58-201ENST00000295628 ZSCAN22P10073 491 aaPredicted RBP18.83■□□□□ 0.61
LRRC58-201ENST00000295628 HVCN1Q96D96 273 aa18.83■□□□□ 0.61
LRRC58-201ENST00000295628 CAVIN2O95810 425 aa18.83■□□□□ 0.61
LRRC58-201ENST00000295628 RILPQ96NA2 401 aa18.83■□□□□ 0.61
LRRC58-201ENST00000295628 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.83■□□□□ 0.61
LRRC58-201ENST00000295628 HARSP12081 509 aaKnown RBP18.83■□□□□ 0.6
LRRC58-201ENST00000295628 KMT5BQ4FZB7 885 aa18.83■□□□□ 0.6
LRRC58-201ENST00000295628 TRIM68Q6AZZ1 485 aa18.83■□□□□ 0.6
LRRC58-201ENST00000295628 NCAPGQ9BPX3 1015 aa18.83■□□□□ 0.6
LRRC58-201ENST00000295628 CCT6AP40227 531 aaKnown RBP18.83■□□□□ 0.6
LRRC58-201ENST00000295628 MX2P20592 715 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 UTP14CQ5TAP6 766 aaKnown RBP18.82■□□□□ 0.6
LRRC58-201ENST00000295628 UBE2Q2Q8WVN8 375 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 RIOK3O14730 519 aaKnown RBP18.82■□□□□ 0.6
LRRC58-201ENST00000295628 OPHN1O60890 802 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 MAN1A1P33908 653 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 COG7P83436 770 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 ARFGAP2Q8N6H7 521 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 CCDC94Q9BW85 323 aaPredicted RBP18.82■□□□□ 0.6
LRRC58-201ENST00000295628 DDX21Q9NR30 783 aaKnown RBP eCLIP18.82■□□□□ 0.6
LRRC58-201ENST00000295628 SPOPO43791 374 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 TRPC3Q13507 836 aa18.82■□□□□ 0.6
LRRC58-201ENST00000295628 SPECC1L-ADORA2AF8WAN1 911 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 STK10O94804 968 aaKnown RBP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 PPP2R3AQ06190 1150 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 RNF168Q8IYW5 571 aaPredicted RBP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 CLEC11AQ9Y240 323 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 ZNF644Q9H582 1327 aaPredicted RBP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 CSRNP2Q9H175 543 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 I3L4J1 428 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 GSTO1P78417 241 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 LDHAL6AQ6ZMR3 332 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 MIER3Q7Z3K6 550 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 KIFAP3Q92845 792 aa18.81■□□□□ 0.6
LRRC58-201ENST00000295628 CDC5LQ99459 802 aaKnown RBP18.81■□□□□ 0.6
LRRC58-201ENST00000295628 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
LRRC58-201ENST00000295628 KRT23Q9C075 422 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 INPP5BP32019 993 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 MGARPQ8TDB4 240 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 NDUFAB1O14561 156 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 STX10O60499 249 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 GBP5Q96PP8 586 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 SLC4A4Q9Y6R1 1079 aa18.8■□□□□ 0.6
LRRC58-201ENST00000295628 ZBTB3Q9H5J0 574 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 TPX2Q9ULW0 747 aaKnown RBP18.79■□□□□ 0.6
LRRC58-201ENST00000295628 CTNND2Q9UQB3 1225 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 ERBINQ96RT1 1412 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 KRT2P35908 639 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 TRIM31Q9BZY9 425 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 WDR44Q5JSH3 913 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 PSPC1Q8WXF1 523 aaKnown RBP18.79■□□□□ 0.6
LRRC58-201ENST00000295628 NACA2Q9H009 215 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 LDHCP07864 332 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 Q6ZUG5 572 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 IFNKQ9P0W0 207 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 ST5P78524 1137 aa18.79■□□□□ 0.6
LRRC58-201ENST00000295628 MUM1Q2TAK8 710 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 SRGAP1Q7Z6B7 1085 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 RFX1P22670 979 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 TAOK1Q7L7X3 1001 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 TACO1Q9BSH4 297 aaKnown RBP18.78■□□□□ 0.6
LRRC58-201ENST00000295628 CCDC38Q502W7 563 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 MRPS27Q92552 414 aaKnown RBP18.78■□□□□ 0.6
LRRC58-201ENST00000295628 HMG20BQ9P0W2 317 aa18.78■□□□□ 0.6
LRRC58-201ENST00000295628 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms