RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SYKP43405 635 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 ZNF335Q9H4Z2 1342 aaPredicted RBP20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 STX1AQ16623 288 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 GDPD2Q9HCC8 539 aa20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 SAP30BPQ9UHR5 308 aaKnown RBP20.26■□□□□ 0.83
CDC42EP3-201ENST00000295324 UBE2HP62256 183 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 KLHDC4Q8TBB5 520 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 ZNF408Q9H9D4 720 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 GOLGA6L10A6NI86 522 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 PPIP5K2O43314 1243 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 STAT6P42226 847 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 BIN1O00499 593 aa20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 TDRD12Q587J7 1177 aaKnown RBP20.25■□□□□ 0.83
CDC42EP3-201ENST00000295324 RTL1A6NKG5 1358 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 YEATS4O95619 227 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 CAVIN2O95810 425 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 ZSCAN12O43309 604 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 MTERF4Q7Z6M4 381 aaKnown RBP20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 GPR162Q16538 588 aa20.24■□□□□ 0.83
CDC42EP3-201ENST00000295324 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 KRT79Q5XKE5 535 aa20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 SEPT7Q16181 437 aaKnown RBP20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 ERLIN1O75477 346 aa20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 NAP1L4Q99733 375 aaKnown RBP20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 DLGAP5Q15398 846 aa20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 CHST3Q7LGC8 479 aa20.23■□□□□ 0.83
CDC42EP3-201ENST00000295324 H7C1D1 291 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 MSL1Q68DK7 614 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 ARMT1Q9H993 441 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 KRT2P35908 639 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 MAP7D2Q96T17 732 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 CTSWP56202 376 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 NCBP1Q09161 790 aaKnown RBP20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 ENOX2Q16206 610 aaKnown RBP20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 USO1O60763 962 aaKnown RBP20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 USP8P40818 1118 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 BIN2Q9UBW5 565 aaPredicted RBP20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 AOX1Q06278 1338 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 APOBRQ0VD83 1088 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
CDC42EP3-201ENST00000295324 TMEM87BQ96K49 555 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 TRIM47Q96LD4 638 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 DNAJC5Q9H3Z4 198 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 MYOM2P54296 1465 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 KDM5CP41229 1560 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 FERMT2Q96AC1 680 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 ATP7BP35670 1465 aa20.21■□□□□ 0.83
CDC42EP3-201ENST00000295324 KIF2AO00139 706 aaPredicted RBP20.2■□□□□ 0.82
CDC42EP3-201ENST00000295324 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
CDC42EP3-201ENST00000295324 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
CDC42EP3-201ENST00000295324 AXDND1Q5T1B0 1012 aaPredicted RBP20.2■□□□□ 0.82
CDC42EP3-201ENST00000295324 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
CDC42EP3-201ENST00000295324 GPAA1O43292 621 aa20.2■□□□□ 0.82
CDC42EP3-201ENST00000295324 RUFY3Q7L099 469 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 MRPS27Q92552 414 aaKnown RBP20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 USP6P35125 1406 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 PREX2Q70Z35 1606 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 H0YHG0 523 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 KCNQ3O43525 872 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 ATP2B4P23634 1241 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 TCHPQ9BT92 498 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 AATFQ9NY61 560 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 BEGAINQ9BUH8 593 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 TRIM37O94972 964 aa20.19■□□□□ 0.82
CDC42EP3-201ENST00000295324 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 KRT13P13646 458 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 UNC5CLQ8IV45 518 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 ZNF165P49910 485 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 KIF5CO60282 957 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 CCDC172P0C7W6 258 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 IL6STP40189 918 aaPredicted RBP20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 AK2P54819 239 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 GLT8D2Q9H1C3 349 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 IVNS1ABPQ9Y6Y0 642 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 AFMP43652 599 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 RRAGBQ5VZM2 374 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 TTLL7Q6ZT98 887 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 CPLX3Q8WVH0 158 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 ZKSCAN3Q9BRR0 538 aa20.18■□□□□ 0.82
CDC42EP3-201ENST00000295324 MAP3K15Q6ZN16 1313 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 ASIC1P78348 528 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 USPL1Q5W0Q7 1092 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 PTPDC1A2A3K4 754 aa20.17■□□□□ 0.82
CDC42EP3-201ENST00000295324 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms