RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
LRRTM1-201ENST00000295057 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
LRRTM1-201ENST00000295057 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
LRRTM1-201ENST00000295057 ATP5JP18859 108 aa17.93■□□□□ 0.46
LRRTM1-201ENST00000295057 IL15P40933 162 aaPredicted RBP17.93■□□□□ 0.46
LRRTM1-201ENST00000295057 TPCN1Q9ULQ1 816 aa17.93■□□□□ 0.46
LRRTM1-201ENST00000295057 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
LRRTM1-201ENST00000295057 ZNF215Q9UL58 517 aaPredicted RBP17.92■□□□□ 0.46
LRRTM1-201ENST00000295057 CCDC66A2RUB6 948 aa17.92■□□□□ 0.46
LRRTM1-201ENST00000295057 ADORA1P30542 326 aa17.92■□□□□ 0.46
LRRTM1-201ENST00000295057 ZNF589Q86UQ0 364 aaPredicted RBP17.92■□□□□ 0.46
LRRTM1-201ENST00000295057 TTLL11Q8NHH1 800 aa17.92■□□□□ 0.46
LRRTM1-201ENST00000295057 A0A1B0GUL7 405 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 CSF1RP07333 972 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 SEC62Q99442 399 aaKnown RBP17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 ZSWIM6Q9HCJ5 1215 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 ST7Q9NRC1 585 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 CYP46A1Q9Y6A2 500 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 NR1I2O75469 434 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 ZNF165P49910 485 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 IFIT5Q13325 482 aaKnown RBP17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 FNBP4Q8N3X1 1017 aaPredicted RBP17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
LRRTM1-201ENST00000295057 ITGA6P23229 1130 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 TCEANC2Q96MN5 208 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 ZNF34Q8IZ26 560 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 RUFY2Q8WXA3 655 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 ZSCAN31Q96LW9 406 aaPredicted RBP17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 TAF6LQ9Y6J9 622 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 ELP1O95163 1332 aa17.9■□□□□ 0.46
LRRTM1-201ENST00000295057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 GOLGA6L4A6NEF3 574 aa17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 GOLIM4O00461 696 aa17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 HSP90AB3PQ58FF7 597 aa17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 KRT222Q8N1A0 295 aa17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 SPATA32Q96LK8 384 aa17.89■□□□□ 0.46
LRRTM1-201ENST00000295057 ERVV-1B6SEH8 477 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 CAMTA2O94983 1202 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 CTSWP56202 376 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 FBXO38Q6PIJ6 1188 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 HAUS7Q99871 368 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 PLA2G12BQ9BX93 195 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 CLSTN2Q9H4D0 955 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
LRRTM1-201ENST00000295057 ERICH4A6NGS2 130 aa17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 SLC20A2Q08357 652 aa17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 ELF2Q15723 593 aa17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 LRRC8AQ8IWT6 810 aa17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 ZNF397Q8NF99 534 aaPredicted RBP17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 CCDC171Q6TFL3 1326 aa17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 MYH14Q7Z406 1995 aaKnown RBP17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 RBM43Q6ZSC3 357 aaKnown RBP17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 LEO1Q8WVC0 666 aaPredicted RBP17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 TIGD1Q96MW7 591 aa17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 TRMT1Q9NXH9 659 aaKnown RBP17.88■□□□□ 0.45
LRRTM1-201ENST00000295057 NPHP1O15259 732 aa17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 CIAO1O76071 339 aa17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 PGBD1Q96JS3 809 aa17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 RBM8AQ9Y5S9 174 aaKnown RBP17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 LDHAL6AQ6ZMR3 332 aa17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 CDHR2Q9BYE9 1310 aa17.87■□□□□ 0.45
LRRTM1-201ENST00000295057 DDX19AQ9NUU7 478 aaKnown RBP17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 ZNF609O15014 1411 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 NUP98P52948 1817 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 A0A087WWV3 80 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 NECTIN1Q15223 517 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 PI16Q6UXB8 463 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 HELBQ8NG08 1087 aaPredicted RBP17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 BICD2Q8TD16 824 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 SNAP23O00161 211 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 SCARF1Q14162 830 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 PTPN14Q15678 1187 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 NYAP1Q6ZVC0 841 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 TM6SF1Q9BZW5 370 aa17.86■□□□□ 0.45
LRRTM1-201ENST00000295057 FKBP4Q02790 459 aaKnown RBP eCLIP17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 STK3Q13188 491 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 METTL24Q5JXM2 366 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 C11orf57Q6ZUT1 292 aaPredicted RBP17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 SCAND2PQ9GZW5 306 aaPredicted RBP17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 GPR108Q9NPR9 543 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 SEC31BQ9NQW1 1179 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 CNNM1Q9NRU3 951 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 PAG1Q9NWQ8 432 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 IFIT1P09914 478 aaKnown RBP17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 SKILP12757 684 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 CREB3L3Q68CJ9 461 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
LRRTM1-201ENST00000295057 ZNF446Q9NWS9 450 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms