RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 CCDC12Q8WUD4 166 aaPredicted RBP11.85□□□□□ -0.51
LMX1A-201ENST00000294816 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 DESI2Q9BSY9 194 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
LMX1A-201ENST00000294816 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 REXO1L1PQ8IX06 675 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
LMX1A-201ENST00000294816 ADAM21Q9UKJ8 722 aa11.85□□□□□ -0.51
LMX1A-201ENST00000294816 CPLX1O14810 134 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
LMX1A-201ENST00000294816 PFKFB1P16118 471 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 DHX8Q14562 1220 aaKnown RBP11.84□□□□□ -0.51
LMX1A-201ENST00000294816 NCAPHQ15003 741 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
LMX1A-201ENST00000294816 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 KCNG4Q8TDN1 519 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 RTEL1Q9NZ71 1219 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 GOLIM4O00461 696 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 HMGB1P09429 215 aaKnown RBP11.84□□□□□ -0.51
LMX1A-201ENST00000294816 HAND2P61296 217 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 ATL3Q6DD88 541 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 STK11IPQ8N1F8 1099 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 SNRKQ9NRH2 765 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 VWA3AA6NCI4 1184 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
LMX1A-201ENST00000294816 ADKP55263 362 aaKnown RBP11.84□□□□□ -0.51
LMX1A-201ENST00000294816 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
LMX1A-201ENST00000294816 ZNF609O15014 1411 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 SYKP43405 635 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
LMX1A-201ENST00000294816 MYL5Q02045 173 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 PNOCQ13519 176 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 DHX58Q96C10 678 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.52
LMX1A-201ENST00000294816 FANCLQ9NW38 375 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
LMX1A-201ENST00000294816 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 AKAP12Q02952 1782 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 A0A1W2PQ27 194 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 A0A1W2PQ64 194 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 A0A1W2PQD8 194 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 PHACTR2O75167 634 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 KCNJ6P48051 423 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 MYD88Q99836 296 aa11.83□□□□□ -0.52
LMX1A-201ENST00000294816 NEO1Q92859 1461 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 H3BQF6 201 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 PSME1Q06323 249 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 PDE11AQ9HCR9 933 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 LZTFL1Q9NQ48 299 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 ANKRD65E5RJM6 399 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 E7EWF7 191 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 ATP8B1O43520 1251 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 HOXB7P09629 217 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 TOGARAM2Q6ZUX3 1019 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 GOLGA5Q8TBA6 731 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
LMX1A-201ENST00000294816 GOLGA8BA8MQT2 603 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 ARHGAP6O43182 974 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 ATP5JP18859 108 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
LMX1A-201ENST00000294816 GOLGA6L1Q8N7Z2 621 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
LMX1A-201ENST00000294816 NBPF6Q5VWK0 638 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 JAKMIP3Q5VZ66 844 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 ANO1Q5XXA6 986 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 CCDC102AQ96A19 550 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 LRRC59Q96AG4 307 aaKnown RBP11.81□□□□□ -0.52
LMX1A-201ENST00000294816 NBPF4Q96M43 638 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 FUT8Q9BYC5 575 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 CHD2O14647 1828 aaKnown RBP11.81□□□□□ -0.52
LMX1A-201ENST00000294816 FDPSP14324 419 aaKnown RBP11.81□□□□□ -0.52
LMX1A-201ENST00000294816 WWC2Q6AWC2 1192 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 VSTM4Q8IW00 320 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 KLF18A0A0U1RQI7 1052 aa11.81□□□□□ -0.52
LMX1A-201ENST00000294816 YEATS4O95619 227 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 RHOXF2BP0C7M4 288 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 ACTN2P35609 894 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
LMX1A-201ENST00000294816 SRLQ86TD4 932 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms