RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.24
NXF1-201ENST00000294172 ZNF532Q9HCE3 1301 aa16.52■□□□□ 0.24
NXF1-201ENST00000294172 ZNF213O14771 459 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 FOSBP53539 338 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 PTF1AQ7RTS3 328 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 SPATA5Q8NB90 893 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.23
NXF1-201ENST00000294172 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 NWD2Q9ULI1 1742 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 LAMA4Q16363 1823 aa16.52■□□□□ 0.23
NXF1-201ENST00000294172 PDE6AP16499 860 aa16.51■□□□□ 0.23
NXF1-201ENST00000294172 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
NXF1-201ENST00000294172 TFIP11Q9UBB9 837 aaKnown RBP16.51■□□□□ 0.23
NXF1-201ENST00000294172 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
NXF1-201ENST00000294172 PDIA3P30101 505 aaKnown RBP16.51■□□□□ 0.23
NXF1-201ENST00000294172 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
NXF1-201ENST00000294172 VPS72Q15906 364 aa16.51■□□□□ 0.23
NXF1-201ENST00000294172 NSUN7Q8NE18 718 aaKnown RBP16.51■□□□□ 0.23
NXF1-201ENST00000294172 LLPHQ9BRT6 129 aaKnown RBP16.51■□□□□ 0.23
NXF1-201ENST00000294172 PTPDC1A2A3K4 754 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 SMARCC2Q8TAQ2 1214 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 PRC1O43663 620 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 BCAMP50895 628 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 RALYLQ86SE5 291 aaKnown RBP16.5■□□□□ 0.23
NXF1-201ENST00000294172 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
NXF1-201ENST00000294172 MCM5P33992 734 aa16.49■□□□□ 0.23
NXF1-201ENST00000294172 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
NXF1-201ENST00000294172 NCOA7Q8NI08 942 aa16.49■□□□□ 0.23
NXF1-201ENST00000294172 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
NXF1-201ENST00000294172 BCL9LQ86UU0 1499 aa16.49■□□□□ 0.23
NXF1-201ENST00000294172 CHRNDQ07001 517 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
NXF1-201ENST00000294172 LRP5O75197 1615 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
NXF1-201ENST00000294172 SPATA32Q96LK8 384 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 MYH7P12883 1935 aa16.48■□□□□ 0.23
NXF1-201ENST00000294172 TCRBV5S4A2TA0A5A2 114 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 HMGN5P82970 282 aaKnown RBP16.47■□□□□ 0.23
NXF1-201ENST00000294172 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
NXF1-201ENST00000294172 SCAND2PQ9GZW5 306 aaPredicted RBP16.47■□□□□ 0.23
NXF1-201ENST00000294172 TRDNQ13061 729 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 RESTQ13127 1097 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 RAB11FIP4Q86YS3 637 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
NXF1-201ENST00000294172 RREB1Q92766 1687 aa16.47■□□□□ 0.23
NXF1-201ENST00000294172 GOLGA6L4A6NEF3 574 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
NXF1-201ENST00000294172 STRBPQ96SI9 672 aaKnown RBP16.46■□□□□ 0.23
NXF1-201ENST00000294172 USP21Q9UK80 565 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
NXF1-201ENST00000294172 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.23
NXF1-201ENST00000294172 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 ANTXR2P58335 489 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
NXF1-201ENST00000294172 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 ATRNO75882 1429 aa16.46■□□□□ 0.23
NXF1-201ENST00000294172 DDX60Q8IY21 1712 aaKnown RBP16.46■□□□□ 0.22
NXF1-201ENST00000294172 RTL9Q8NET4 1388 aa16.46■□□□□ 0.22
NXF1-201ENST00000294172 ELP1O95163 1332 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 GOLGA8BA8MQT2 603 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 MBD4O95243 580 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 GUCY1B3Q02153 619 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 TBC1D9BQ66K14 1250 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 FBXL16Q8N461 479 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 ESPNB1AK53 854 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
NXF1-201ENST00000294172 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
NXF1-201ENST00000294172 ARMT1Q9H993 441 aa16.45■□□□□ 0.22
NXF1-201ENST00000294172 EVCP57679 992 aa16.44■□□□□ 0.22
NXF1-201ENST00000294172 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
NXF1-201ENST00000294172 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
NXF1-201ENST00000294172 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
NXF1-201ENST00000294172 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
NXF1-201ENST00000294172 GNPATO15228 680 aa16.44■□□□□ 0.22
NXF1-201ENST00000294172 LIG1P18858 919 aa16.44■□□□□ 0.22
NXF1-201ENST00000294172 NAA16Q6N069 864 aaPredicted RBP16.44■□□□□ 0.22
NXF1-201ENST00000294172 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
NXF1-201ENST00000294172 LRP2BPQ9P2M1 347 aa16.44■□□□□ 0.22
NXF1-201ENST00000294172 SALL1Q9NSC2 1324 aa16.43■□□□□ 0.22
NXF1-201ENST00000294172 CLCN1P35523 988 aa16.43■□□□□ 0.22
NXF1-201ENST00000294172 NKX2-3Q8TAU0 364 aa16.43■□□□□ 0.22
NXF1-201ENST00000294172 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
NXF1-201ENST00000294172 PATL2C9JE40 543 aaKnown RBP16.42■□□□□ 0.22
NXF1-201ENST00000294172 GYG1P46976 350 aa16.42■□□□□ 0.22
NXF1-201ENST00000294172 NAPBQ9H115 298 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms