RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 CCDC183Q5T5S1 534 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 RYBPQ8N488 228 aaPredicted RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 KIF2AO00139 706 aaPredicted RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 ZNF569Q5MCW4 686 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 CPLX4Q7Z7G2 160 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 IFT74Q96LB3 600 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 LRRC2Q9BYS8 371 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 CCDC122Q5T0U0 273 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 NAA16Q6N069 864 aaPredicted RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 AFAP1L2Q8N4X5 818 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 GANCQ8TET4 914 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 GLRX3O76003 335 aaKnown RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 NBPF7P0C2Y1 421 aaPredicted RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 ZNF131P52739 623 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 RNASE9P60153 205 aaKnown RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 PPP2R5AQ15172 486 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 SKIV2LQ15477 1246 aaKnown RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 ANKRD35Q8N283 1001 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 TACC1O75410 805 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 ERCC6LQ2NKX8 1250 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
SLX4-201ENST00000294008 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 PRKAG2Q9UGJ0 569 aa13.99□□□□□ -0.17
SLX4-201ENST00000294008 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 INTS8Q75QN2 995 aaKnown RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 FOXO3O43524 673 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 CYLC1P35663 651 aaPredicted RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 KSR1Q8IVT5 923 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 MICALL1Q8N3F8 863 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 SUDS3Q9H7L9 328 aaPredicted RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 WDR48Q8TAF3 677 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 NEDD9Q14511 834 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 KIF22Q14807 665 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 RPS6KA2Q15349 733 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 FAM193BQ96PV7 902 aaPredicted RBP13.98□□□□□ -0.17
SLX4-201ENST00000294008 SLC4A1P02730 911 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 GJB2P29033 226 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
SLX4-201ENST00000294008 STRN3Q13033 797 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 SEL1L2Q5TEA6 688 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 MAP3K2Q9Y2U5 619 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 STX1AQ16623 288 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 AMOTQ4VCS5 1084 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 HS2ST1Q7LGA3 356 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
SLX4-201ENST00000294008 NFE2L2Q16236 605 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 DHX58Q96C10 678 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
SLX4-201ENST00000294008 SESTD1Q86VW0 696 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 CXorf38Q8TB03 319 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 SAT1P21673 171 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 BLVRAP53004 296 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 MVPQ14764 893 aaKnown RBP13.97□□□□□ -0.17
SLX4-201ENST00000294008 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 NXNQ6DKJ4 435 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 GPIHBP1Q8IV16 184 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 SMCR8Q8TEV9 937 aaPredicted RBP13.97□□□□□ -0.17
SLX4-201ENST00000294008 PAGR1Q9BTK6 254 aa13.97□□□□□ -0.17
SLX4-201ENST00000294008 SLC12A2P55011 1212 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
SLX4-201ENST00000294008 CD2APQ9Y5K6 639 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 NCOA7Q8NI08 942 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 UBASH3AP57075 661 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 SYNDIG1LA6NDD5 238 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.17
SLX4-201ENST00000294008 NEK11Q8NG66 645 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.17
SLX4-201ENST00000294008 ARHGEF2Q92974 986 aaKnown RBP13.96□□□□□ -0.17
SLX4-201ENST00000294008 HP1BP3Q5SSJ5 553 aaPredicted RBP13.96□□□□□ -0.17
SLX4-201ENST00000294008 NUCKS1Q9H1E3 243 aaKnown RBP13.96□□□□□ -0.17
SLX4-201ENST00000294008 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.18
SLX4-201ENST00000294008 SPOPO43791 374 aa13.96□□□□□ -0.18
SLX4-201ENST00000294008 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.18
SLX4-201ENST00000294008 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.18
SLX4-201ENST00000294008 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.18
SLX4-201ENST00000294008 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.18
SLX4-201ENST00000294008 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
SLX4-201ENST00000294008 UTP14CQ5TAP6 766 aaKnown RBP13.95□□□□□ -0.18
SLX4-201ENST00000294008 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
SLX4-201ENST00000294008 METTL13Q8N6R0 699 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 NBPF3Q9H094 633 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 NUCB1Q02818 461 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 VCX3BQ9H321 246 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 HAUS2Q9NVX0 235 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 MAP7Q14244 749 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
SLX4-201ENST00000294008 CARD10Q9BWT7 1032 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms