RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CPA1P15085 419 aa18.23■□□□□ 0.51
SSRP1-202ENST00000293880 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SSRP1-202ENST00000293880 LRRC27Q9C0I9 530 aa18.23■□□□□ 0.51
SSRP1-202ENST00000293880 PLEKHA4Q9H4M7 779 aa18.23■□□□□ 0.51
SSRP1-202ENST00000293880 EBAG9O00559 213 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 BAG3O95817 575 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 CCDC172P0C7W6 258 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 KRT2P35908 639 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 KRT23Q9C075 422 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 SUDS3Q9H7L9 328 aaPredicted RBP18.22■□□□□ 0.51
SSRP1-202ENST00000293880 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 PPP2R3AQ06190 1150 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 ACSBG1Q96GR2 724 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 SP4Q02446 784 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 KIF5AQ12840 1032 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 NEK11Q8NG66 645 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 UIMC1Q96RL1 719 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
SSRP1-202ENST00000293880 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
SSRP1-202ENST00000293880 PDE1AP54750 535 aa18.21■□□□□ 0.51
SSRP1-202ENST00000293880 IRX5P78411 483 aaPredicted RBP18.21■□□□□ 0.51
SSRP1-202ENST00000293880 SPTLC2O15270 562 aa18.21■□□□□ 0.51
SSRP1-202ENST00000293880 ERMNQ8TAM6 284 aa18.21■□□□□ 0.51
SSRP1-202ENST00000293880 FAM76AQ8TAV0 307 aa18.21■□□□□ 0.51
SSRP1-202ENST00000293880 GRM1Q13255 1194 aa18.21■□□□□ 0.51
SSRP1-202ENST00000293880 A0A1B0GUL7 405 aa18.21■□□□□ 0.5
SSRP1-202ENST00000293880 UBAP1LF5GYI3 381 aa18.21■□□□□ 0.5
SSRP1-202ENST00000293880 SLC39A6Q13433 755 aa18.21■□□□□ 0.5
SSRP1-202ENST00000293880 PSMA7O14818 248 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 VIMP08670 466 aaKnown RBP18.2■□□□□ 0.5
SSRP1-202ENST00000293880 CEP85LQ5SZL2 805 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 CCDC42Q96M95 316 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 STMN4Q9H169 189 aaPredicted RBP18.2■□□□□ 0.5
SSRP1-202ENST00000293880 CAMSAP2Q08AD1 1489 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 KRT5P13647 590 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 SAMD15Q9P1V8 674 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 ZFYP08048 801 aaPredicted RBP18.2■□□□□ 0.5
SSRP1-202ENST00000293880 KRT83P78385 493 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 PPP1R21Q6ZMI0 780 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
SSRP1-202ENST00000293880 CFAP157Q5JU67 520 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 A0A1B0GVL5 298 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 PCK1P35558 622 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
SSRP1-202ENST00000293880 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
SSRP1-202ENST00000293880 KRT86O43790 486 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 SEC24BO95487 1268 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 KRT9P35527 623 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 RASA3Q14644 834 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 CCDC77Q9BR77 488 aa18.19■□□□□ 0.5
SSRP1-202ENST00000293880 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 TNNI2P48788 182 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 SLC9C2Q5TAH2 1124 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 IDI1Q13907 227 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 ZNF174Q15697 407 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 GBP7Q8N8V2 638 aaPredicted RBP18.18■□□□□ 0.5
SSRP1-202ENST00000293880 VTI1AQ96AJ9 217 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
SSRP1-202ENST00000293880 PTPDC1A2A3K4 754 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 EVCP57679 992 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 PLVAPQ9BX97 442 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 BUB1BO60566 1050 aaPredicted RBP18.17■□□□□ 0.5
SSRP1-202ENST00000293880 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 MAPK8IP1Q9UQF2 711 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 HDXQ7Z353 690 aa18.17■□□□□ 0.5
SSRP1-202ENST00000293880 OGFRQ9NZT2 677 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 SAP30BPQ9UHR5 308 aaKnown RBP18.16■□□□□ 0.5
SSRP1-202ENST00000293880 ODF2LQ9ULJ1 636 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 RAB3GAP1Q15042 981 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 ESR2Q92731 530 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
SSRP1-202ENST00000293880 DDX12PQ92771 950 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 SH3BP5O60239 455 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
SSRP1-202ENST00000293880 AFAP1L1Q8TED9 768 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 WHAMMQ8TF30 809 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 UTP14CQ5TAP6 766 aaKnown RBP18.16■□□□□ 0.5
SSRP1-202ENST00000293880 LMBR1Q8WVP7 490 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 BAG1Q99933 345 aaPredicted RBP18.16■□□□□ 0.5
SSRP1-202ENST00000293880 TRIM31Q9BZY9 425 aa18.16■□□□□ 0.5
SSRP1-202ENST00000293880 RFC4P35249 363 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 GSTO1P78417 241 aa18.15■□□□□ 0.5
SSRP1-202ENST00000293880 HELBQ8NG08 1087 aaPredicted RBP18.15■□□□□ 0.5
SSRP1-202ENST00000293880 MORC4Q8TE76 937 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms